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Overexpressed pseudogene MT1L associated with tumor immune infiltrates and indicates a worse prognosis in BLCA
BACKGROUND: BLCA is a common cancer worldwide, and it is both aggressive and fatal. Immunotherapy (ICT) has achieved an excellent curative effect in BLCA; however, only some BLCA patients can benefit from ICT. MT1L is a pseudogene, and a previous study suggested that MT1L can be used as an indicator...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8063461/ https://www.ncbi.nlm.nih.gov/pubmed/33888142 http://dx.doi.org/10.1186/s12957-021-02231-4 |
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author | Ding, Yanpeng Liu, Nuomin Chen, Mengge Xu, Yulian Fang, Sha Xiang, Wenbin Hua, Xinying Chen, Gaili Zhong, Yahua Yu, Haijun |
author_facet | Ding, Yanpeng Liu, Nuomin Chen, Mengge Xu, Yulian Fang, Sha Xiang, Wenbin Hua, Xinying Chen, Gaili Zhong, Yahua Yu, Haijun |
author_sort | Ding, Yanpeng |
collection | PubMed |
description | BACKGROUND: BLCA is a common cancer worldwide, and it is both aggressive and fatal. Immunotherapy (ICT) has achieved an excellent curative effect in BLCA; however, only some BLCA patients can benefit from ICT. MT1L is a pseudogene, and a previous study suggested that MT1L can be used as an indicator of prognosis in colorectal cancer. However, the role of MT1L in BLCA has not yet been determined. METHODS: Data were collected from TCGA, and logistic regression, Kaplan-Meier plotter, and multivariate Cox analysis were performed to demonstrate the correlation between the pseudogene MT1L and the prognosis of BLCA. To identify the association of MT1L with tumor-infiltrating immune cells, TIMER and TISIDB were utilized. Additionally, GSEA was performed to elucidate the potential biological function. RESULTS: The expression of MT1L was decreased in BLCA. Additionally, MT1L was positively correlated with immune cells, such as Tregs (ρ = 0.708) and MDSCs (ρ = 0.664). We also confirmed that MT1L is related to typical markers of immune cells, such as PD-1 and CTLA-4. In addition, a high MT1L expression level was associated with the advanced T and N and high grade in BLCA. Increased expression of MT1L was significantly associated with shorter OS times of BLCA patients (p < 0.05). Multivariate Cox analysis revealed that MT1L expression could be an independent prognostic factor in BLCA. CONCLUSION: Collectively, our findings demonstrated that the pseudogene MT1L regulates the immune microenvironment, correlates with poor survival, and is an independent prognostic biomarker in BLCA. |
format | Online Article Text |
id | pubmed-8063461 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-80634612021-04-23 Overexpressed pseudogene MT1L associated with tumor immune infiltrates and indicates a worse prognosis in BLCA Ding, Yanpeng Liu, Nuomin Chen, Mengge Xu, Yulian Fang, Sha Xiang, Wenbin Hua, Xinying Chen, Gaili Zhong, Yahua Yu, Haijun World J Surg Oncol Research BACKGROUND: BLCA is a common cancer worldwide, and it is both aggressive and fatal. Immunotherapy (ICT) has achieved an excellent curative effect in BLCA; however, only some BLCA patients can benefit from ICT. MT1L is a pseudogene, and a previous study suggested that MT1L can be used as an indicator of prognosis in colorectal cancer. However, the role of MT1L in BLCA has not yet been determined. METHODS: Data were collected from TCGA, and logistic regression, Kaplan-Meier plotter, and multivariate Cox analysis were performed to demonstrate the correlation between the pseudogene MT1L and the prognosis of BLCA. To identify the association of MT1L with tumor-infiltrating immune cells, TIMER and TISIDB were utilized. Additionally, GSEA was performed to elucidate the potential biological function. RESULTS: The expression of MT1L was decreased in BLCA. Additionally, MT1L was positively correlated with immune cells, such as Tregs (ρ = 0.708) and MDSCs (ρ = 0.664). We also confirmed that MT1L is related to typical markers of immune cells, such as PD-1 and CTLA-4. In addition, a high MT1L expression level was associated with the advanced T and N and high grade in BLCA. Increased expression of MT1L was significantly associated with shorter OS times of BLCA patients (p < 0.05). Multivariate Cox analysis revealed that MT1L expression could be an independent prognostic factor in BLCA. CONCLUSION: Collectively, our findings demonstrated that the pseudogene MT1L regulates the immune microenvironment, correlates with poor survival, and is an independent prognostic biomarker in BLCA. BioMed Central 2021-04-22 /pmc/articles/PMC8063461/ /pubmed/33888142 http://dx.doi.org/10.1186/s12957-021-02231-4 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Ding, Yanpeng Liu, Nuomin Chen, Mengge Xu, Yulian Fang, Sha Xiang, Wenbin Hua, Xinying Chen, Gaili Zhong, Yahua Yu, Haijun Overexpressed pseudogene MT1L associated with tumor immune infiltrates and indicates a worse prognosis in BLCA |
title | Overexpressed pseudogene MT1L associated with tumor immune infiltrates and indicates a worse prognosis in BLCA |
title_full | Overexpressed pseudogene MT1L associated with tumor immune infiltrates and indicates a worse prognosis in BLCA |
title_fullStr | Overexpressed pseudogene MT1L associated with tumor immune infiltrates and indicates a worse prognosis in BLCA |
title_full_unstemmed | Overexpressed pseudogene MT1L associated with tumor immune infiltrates and indicates a worse prognosis in BLCA |
title_short | Overexpressed pseudogene MT1L associated with tumor immune infiltrates and indicates a worse prognosis in BLCA |
title_sort | overexpressed pseudogene mt1l associated with tumor immune infiltrates and indicates a worse prognosis in blca |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8063461/ https://www.ncbi.nlm.nih.gov/pubmed/33888142 http://dx.doi.org/10.1186/s12957-021-02231-4 |
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