Cargando…

Second waves, social distancing, and the spread of COVID-19 across the USA

We recently described a dynamic causal model of a COVID-19 outbreak within a single region. Here, we combine several instantiations of this (epidemic) model to create a (pandemic) model of viral spread among regions. Our focus is on a second wave of new cases that may result from loss of immunity—an...

Descripción completa

Detalles Bibliográficos
Autores principales: Friston, Karl J., Parr, Thomas, Zeidman, Peter, Razi, Adeel, Flandin, Guillaume, Daunizeau, Jean, Hulme, Oliver J., Billig, Alexander J., Litvak, Vladimir, Price, Catherine J., Moran, Rosalyn J., Lambert, Christian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000 Research Limited 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8063524/
https://www.ncbi.nlm.nih.gov/pubmed/33954262
http://dx.doi.org/10.12688/wellcomeopenres.15986.3
_version_ 1783681965514293248
author Friston, Karl J.
Parr, Thomas
Zeidman, Peter
Razi, Adeel
Flandin, Guillaume
Daunizeau, Jean
Hulme, Oliver J.
Billig, Alexander J.
Litvak, Vladimir
Price, Catherine J.
Moran, Rosalyn J.
Lambert, Christian
author_facet Friston, Karl J.
Parr, Thomas
Zeidman, Peter
Razi, Adeel
Flandin, Guillaume
Daunizeau, Jean
Hulme, Oliver J.
Billig, Alexander J.
Litvak, Vladimir
Price, Catherine J.
Moran, Rosalyn J.
Lambert, Christian
author_sort Friston, Karl J.
collection PubMed
description We recently described a dynamic causal model of a COVID-19 outbreak within a single region. Here, we combine several instantiations of this (epidemic) model to create a (pandemic) model of viral spread among regions. Our focus is on a second wave of new cases that may result from loss of immunity—and the exchange of people between regions—and how mortality rates can be ameliorated under different strategic responses. In particular, we consider hard or soft social distancing strategies predicated on national (Federal) or regional (State) estimates of the prevalence of infection in the population. The modelling is demonstrated using timeseries of new cases and deaths from the United States to estimate the parameters of a factorial (compartmental) epidemiological model of each State and, crucially, coupling between States. Using Bayesian model reduction, we identify the effective connectivity between States that best explains the initial phases of the outbreak in the United States. Using the ensuing posterior parameter estimates, we then evaluate the likely outcomes of different policies in terms of mortality, working days lost due to lockdown and demands upon critical care. The provisional results of this modelling suggest that social distancing and loss of immunity are the two key factors that underwrite a return to endemic equilibrium.
format Online
Article
Text
id pubmed-8063524
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher F1000 Research Limited
record_format MEDLINE/PubMed
spelling pubmed-80635242021-05-04 Second waves, social distancing, and the spread of COVID-19 across the USA Friston, Karl J. Parr, Thomas Zeidman, Peter Razi, Adeel Flandin, Guillaume Daunizeau, Jean Hulme, Oliver J. Billig, Alexander J. Litvak, Vladimir Price, Catherine J. Moran, Rosalyn J. Lambert, Christian Wellcome Open Res Method Article We recently described a dynamic causal model of a COVID-19 outbreak within a single region. Here, we combine several instantiations of this (epidemic) model to create a (pandemic) model of viral spread among regions. Our focus is on a second wave of new cases that may result from loss of immunity—and the exchange of people between regions—and how mortality rates can be ameliorated under different strategic responses. In particular, we consider hard or soft social distancing strategies predicated on national (Federal) or regional (State) estimates of the prevalence of infection in the population. The modelling is demonstrated using timeseries of new cases and deaths from the United States to estimate the parameters of a factorial (compartmental) epidemiological model of each State and, crucially, coupling between States. Using Bayesian model reduction, we identify the effective connectivity between States that best explains the initial phases of the outbreak in the United States. Using the ensuing posterior parameter estimates, we then evaluate the likely outcomes of different policies in terms of mortality, working days lost due to lockdown and demands upon critical care. The provisional results of this modelling suggest that social distancing and loss of immunity are the two key factors that underwrite a return to endemic equilibrium. F1000 Research Limited 2021-03-15 /pmc/articles/PMC8063524/ /pubmed/33954262 http://dx.doi.org/10.12688/wellcomeopenres.15986.3 Text en Copyright: © 2021 Friston KJ et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Method Article
Friston, Karl J.
Parr, Thomas
Zeidman, Peter
Razi, Adeel
Flandin, Guillaume
Daunizeau, Jean
Hulme, Oliver J.
Billig, Alexander J.
Litvak, Vladimir
Price, Catherine J.
Moran, Rosalyn J.
Lambert, Christian
Second waves, social distancing, and the spread of COVID-19 across the USA
title Second waves, social distancing, and the spread of COVID-19 across the USA
title_full Second waves, social distancing, and the spread of COVID-19 across the USA
title_fullStr Second waves, social distancing, and the spread of COVID-19 across the USA
title_full_unstemmed Second waves, social distancing, and the spread of COVID-19 across the USA
title_short Second waves, social distancing, and the spread of COVID-19 across the USA
title_sort second waves, social distancing, and the spread of covid-19 across the usa
topic Method Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8063524/
https://www.ncbi.nlm.nih.gov/pubmed/33954262
http://dx.doi.org/10.12688/wellcomeopenres.15986.3
work_keys_str_mv AT fristonkarlj secondwavessocialdistancingandthespreadofcovid19acrosstheusa
AT parrthomas secondwavessocialdistancingandthespreadofcovid19acrosstheusa
AT zeidmanpeter secondwavessocialdistancingandthespreadofcovid19acrosstheusa
AT raziadeel secondwavessocialdistancingandthespreadofcovid19acrosstheusa
AT flandinguillaume secondwavessocialdistancingandthespreadofcovid19acrosstheusa
AT daunizeaujean secondwavessocialdistancingandthespreadofcovid19acrosstheusa
AT hulmeoliverj secondwavessocialdistancingandthespreadofcovid19acrosstheusa
AT billigalexanderj secondwavessocialdistancingandthespreadofcovid19acrosstheusa
AT litvakvladimir secondwavessocialdistancingandthespreadofcovid19acrosstheusa
AT pricecatherinej secondwavessocialdistancingandthespreadofcovid19acrosstheusa
AT moranrosalynj secondwavessocialdistancingandthespreadofcovid19acrosstheusa
AT lambertchristian secondwavessocialdistancingandthespreadofcovid19acrosstheusa