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Second waves, social distancing, and the spread of COVID-19 across the USA
We recently described a dynamic causal model of a COVID-19 outbreak within a single region. Here, we combine several instantiations of this (epidemic) model to create a (pandemic) model of viral spread among regions. Our focus is on a second wave of new cases that may result from loss of immunity—an...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
F1000 Research Limited
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8063524/ https://www.ncbi.nlm.nih.gov/pubmed/33954262 http://dx.doi.org/10.12688/wellcomeopenres.15986.3 |
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author | Friston, Karl J. Parr, Thomas Zeidman, Peter Razi, Adeel Flandin, Guillaume Daunizeau, Jean Hulme, Oliver J. Billig, Alexander J. Litvak, Vladimir Price, Catherine J. Moran, Rosalyn J. Lambert, Christian |
author_facet | Friston, Karl J. Parr, Thomas Zeidman, Peter Razi, Adeel Flandin, Guillaume Daunizeau, Jean Hulme, Oliver J. Billig, Alexander J. Litvak, Vladimir Price, Catherine J. Moran, Rosalyn J. Lambert, Christian |
author_sort | Friston, Karl J. |
collection | PubMed |
description | We recently described a dynamic causal model of a COVID-19 outbreak within a single region. Here, we combine several instantiations of this (epidemic) model to create a (pandemic) model of viral spread among regions. Our focus is on a second wave of new cases that may result from loss of immunity—and the exchange of people between regions—and how mortality rates can be ameliorated under different strategic responses. In particular, we consider hard or soft social distancing strategies predicated on national (Federal) or regional (State) estimates of the prevalence of infection in the population. The modelling is demonstrated using timeseries of new cases and deaths from the United States to estimate the parameters of a factorial (compartmental) epidemiological model of each State and, crucially, coupling between States. Using Bayesian model reduction, we identify the effective connectivity between States that best explains the initial phases of the outbreak in the United States. Using the ensuing posterior parameter estimates, we then evaluate the likely outcomes of different policies in terms of mortality, working days lost due to lockdown and demands upon critical care. The provisional results of this modelling suggest that social distancing and loss of immunity are the two key factors that underwrite a return to endemic equilibrium. |
format | Online Article Text |
id | pubmed-8063524 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | F1000 Research Limited |
record_format | MEDLINE/PubMed |
spelling | pubmed-80635242021-05-04 Second waves, social distancing, and the spread of COVID-19 across the USA Friston, Karl J. Parr, Thomas Zeidman, Peter Razi, Adeel Flandin, Guillaume Daunizeau, Jean Hulme, Oliver J. Billig, Alexander J. Litvak, Vladimir Price, Catherine J. Moran, Rosalyn J. Lambert, Christian Wellcome Open Res Method Article We recently described a dynamic causal model of a COVID-19 outbreak within a single region. Here, we combine several instantiations of this (epidemic) model to create a (pandemic) model of viral spread among regions. Our focus is on a second wave of new cases that may result from loss of immunity—and the exchange of people between regions—and how mortality rates can be ameliorated under different strategic responses. In particular, we consider hard or soft social distancing strategies predicated on national (Federal) or regional (State) estimates of the prevalence of infection in the population. The modelling is demonstrated using timeseries of new cases and deaths from the United States to estimate the parameters of a factorial (compartmental) epidemiological model of each State and, crucially, coupling between States. Using Bayesian model reduction, we identify the effective connectivity between States that best explains the initial phases of the outbreak in the United States. Using the ensuing posterior parameter estimates, we then evaluate the likely outcomes of different policies in terms of mortality, working days lost due to lockdown and demands upon critical care. The provisional results of this modelling suggest that social distancing and loss of immunity are the two key factors that underwrite a return to endemic equilibrium. F1000 Research Limited 2021-03-15 /pmc/articles/PMC8063524/ /pubmed/33954262 http://dx.doi.org/10.12688/wellcomeopenres.15986.3 Text en Copyright: © 2021 Friston KJ et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Method Article Friston, Karl J. Parr, Thomas Zeidman, Peter Razi, Adeel Flandin, Guillaume Daunizeau, Jean Hulme, Oliver J. Billig, Alexander J. Litvak, Vladimir Price, Catherine J. Moran, Rosalyn J. Lambert, Christian Second waves, social distancing, and the spread of COVID-19 across the USA |
title | Second waves, social distancing, and the spread of COVID-19 across the USA |
title_full | Second waves, social distancing, and the spread of COVID-19 across the USA |
title_fullStr | Second waves, social distancing, and the spread of COVID-19 across the USA |
title_full_unstemmed | Second waves, social distancing, and the spread of COVID-19 across the USA |
title_short | Second waves, social distancing, and the spread of COVID-19 across the USA |
title_sort | second waves, social distancing, and the spread of covid-19 across the usa |
topic | Method Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8063524/ https://www.ncbi.nlm.nih.gov/pubmed/33954262 http://dx.doi.org/10.12688/wellcomeopenres.15986.3 |
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