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periodicDNA: an R/Bioconductor package to investigate k-mer periodicity in DNA

Periodic occurrences of oligonucleotide sequences can impact the physical properties of DNA. For example, DNA bendability is modulated by 10-bp periodic occurrences of WW (W = A/T) dinucleotides. We present periodicDNA, an R package to identify k-mer periodicity and generate continuous tracks of k-m...

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Detalles Bibliográficos
Autores principales:	Serizay, Jacques, Ahringer, Julie
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	F1000 Research Limited 2021
Materias:	Software Tool Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8063535/ https://www.ncbi.nlm.nih.gov/pubmed/33953908 http://dx.doi.org/10.12688/f1000research.51143.1

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