Whole-Genome Sequencing and De Novo Assembly of 61 Staphylococcus pseudintermedius Isolates from Healthy Dogs and Dogs with Pyoderma

We have de novo assembled and polished 61 Staphylococcus pseudintermedius genome sequences with Nanopore-only long reads. Completeness was 99.25%. The average genome size was 2.70 Mbp, comprising 2,506 coding sequences, 19 complete rRNAs, 56 to 59 tRNAs, and 4 noncoding RNAs (ncRNAs), as well as CRI...

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Autores principales: Francino, O., Pérez, D., Viñes, J., Fonticoba, R., Madroñero, S., Meroni, G., Martino, P., Martínez, S., Cusco, A., Fàbregas, N., Migura-García, L., Ferrer, L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2021
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8063643/
https://www.ncbi.nlm.nih.gov/pubmed/33888500
http://dx.doi.org/10.1128/MRA.00152-21
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author Francino, O.
Pérez, D.
Viñes, J.
Fonticoba, R.
Madroñero, S.
Meroni, G.
Martino, P.
Martínez, S.
Cusco, A.
Fàbregas, N.
Migura-García, L.
Ferrer, L.
author_facet Francino, O.
Pérez, D.
Viñes, J.
Fonticoba, R.
Madroñero, S.
Meroni, G.
Martino, P.
Martínez, S.
Cusco, A.
Fàbregas, N.
Migura-García, L.
Ferrer, L.
author_sort Francino, O.
collection PubMed
description We have de novo assembled and polished 61 Staphylococcus pseudintermedius genome sequences with Nanopore-only long reads. Completeness was 99.25%. The average genome size was 2.70 Mbp, comprising 2,506 coding sequences, 19 complete rRNAs, 56 to 59 tRNAs, and 4 noncoding RNAs (ncRNAs), as well as CRISPR arrays.
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spelling pubmed-80636432021-05-04 Whole-Genome Sequencing and De Novo Assembly of 61 Staphylococcus pseudintermedius Isolates from Healthy Dogs and Dogs with Pyoderma Francino, O. Pérez, D. Viñes, J. Fonticoba, R. Madroñero, S. Meroni, G. Martino, P. Martínez, S. Cusco, A. Fàbregas, N. Migura-García, L. Ferrer, L. Microbiol Resour Announc Genome Sequences We have de novo assembled and polished 61 Staphylococcus pseudintermedius genome sequences with Nanopore-only long reads. Completeness was 99.25%. The average genome size was 2.70 Mbp, comprising 2,506 coding sequences, 19 complete rRNAs, 56 to 59 tRNAs, and 4 noncoding RNAs (ncRNAs), as well as CRISPR arrays. American Society for Microbiology 2021-04-22 /pmc/articles/PMC8063643/ /pubmed/33888500 http://dx.doi.org/10.1128/MRA.00152-21 Text en Copyright © 2021 Francino et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Francino, O.
Pérez, D.
Viñes, J.
Fonticoba, R.
Madroñero, S.
Meroni, G.
Martino, P.
Martínez, S.
Cusco, A.
Fàbregas, N.
Migura-García, L.
Ferrer, L.
Whole-Genome Sequencing and De Novo Assembly of 61 Staphylococcus pseudintermedius Isolates from Healthy Dogs and Dogs with Pyoderma
title Whole-Genome Sequencing and De Novo Assembly of 61 Staphylococcus pseudintermedius Isolates from Healthy Dogs and Dogs with Pyoderma
title_full Whole-Genome Sequencing and De Novo Assembly of 61 Staphylococcus pseudintermedius Isolates from Healthy Dogs and Dogs with Pyoderma
title_fullStr Whole-Genome Sequencing and De Novo Assembly of 61 Staphylococcus pseudintermedius Isolates from Healthy Dogs and Dogs with Pyoderma
title_full_unstemmed Whole-Genome Sequencing and De Novo Assembly of 61 Staphylococcus pseudintermedius Isolates from Healthy Dogs and Dogs with Pyoderma
title_short Whole-Genome Sequencing and De Novo Assembly of 61 Staphylococcus pseudintermedius Isolates from Healthy Dogs and Dogs with Pyoderma
title_sort whole-genome sequencing and de novo assembly of 61 staphylococcus pseudintermedius isolates from healthy dogs and dogs with pyoderma
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8063643/
https://www.ncbi.nlm.nih.gov/pubmed/33888500
http://dx.doi.org/10.1128/MRA.00152-21
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