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Application of DNA barcodes and spatial analysis in conservation genetics and modeling of Iranian Salicornia genetic resources

Iran is one of the origins of some Salicornia species. Nevertheless, comprehensive research has not been conducted on genetic potential, distribution, selection of populations, and the economic utilization of Salicornia in Iran. In the current study, Salicornia was collected based on the previous da...

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Autores principales: Zeinalabedini, Mehrshad, Khoshkholgh Sima, Nayer Azam, Ghaffari, Mohammad Reza, Ebadi, Ali, Farsi, Maryam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8064562/
https://www.ncbi.nlm.nih.gov/pubmed/33891613
http://dx.doi.org/10.1371/journal.pone.0241162
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author Zeinalabedini, Mehrshad
Khoshkholgh Sima, Nayer Azam
Ghaffari, Mohammad Reza
Ebadi, Ali
Farsi, Maryam
author_facet Zeinalabedini, Mehrshad
Khoshkholgh Sima, Nayer Azam
Ghaffari, Mohammad Reza
Ebadi, Ali
Farsi, Maryam
author_sort Zeinalabedini, Mehrshad
collection PubMed
description Iran is one of the origins of some Salicornia species. Nevertheless, comprehensive research has not been conducted on genetic potential, distribution, selection of populations, and the economic utilization of Salicornia in Iran. In the current study, Salicornia was collected based on the previous data available for 26 different geographical locations of provinces in Iran. We examined Salicornia plants’ universality DNA barcodes, including rbcL, matK, trnH-psbA, and ITS, and their species identification abilities and identified six species groups. Subsequently, accurate modeling of distributed areas was provided with MAXENT and highlighted the valuable information on the diversity of specific geographical regions, conservation status of existing species, prioritization of conservation areas, and selection of Agro-Ecological areas. Together, this type of integrative study will provide useful information for managing and utilizing Salicornia genetic resources in Iran.
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spelling pubmed-80645622021-05-04 Application of DNA barcodes and spatial analysis in conservation genetics and modeling of Iranian Salicornia genetic resources Zeinalabedini, Mehrshad Khoshkholgh Sima, Nayer Azam Ghaffari, Mohammad Reza Ebadi, Ali Farsi, Maryam PLoS One Research Article Iran is one of the origins of some Salicornia species. Nevertheless, comprehensive research has not been conducted on genetic potential, distribution, selection of populations, and the economic utilization of Salicornia in Iran. In the current study, Salicornia was collected based on the previous data available for 26 different geographical locations of provinces in Iran. We examined Salicornia plants’ universality DNA barcodes, including rbcL, matK, trnH-psbA, and ITS, and their species identification abilities and identified six species groups. Subsequently, accurate modeling of distributed areas was provided with MAXENT and highlighted the valuable information on the diversity of specific geographical regions, conservation status of existing species, prioritization of conservation areas, and selection of Agro-Ecological areas. Together, this type of integrative study will provide useful information for managing and utilizing Salicornia genetic resources in Iran. Public Library of Science 2021-04-23 /pmc/articles/PMC8064562/ /pubmed/33891613 http://dx.doi.org/10.1371/journal.pone.0241162 Text en © 2021 Zeinalabedini et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Zeinalabedini, Mehrshad
Khoshkholgh Sima, Nayer Azam
Ghaffari, Mohammad Reza
Ebadi, Ali
Farsi, Maryam
Application of DNA barcodes and spatial analysis in conservation genetics and modeling of Iranian Salicornia genetic resources
title Application of DNA barcodes and spatial analysis in conservation genetics and modeling of Iranian Salicornia genetic resources
title_full Application of DNA barcodes and spatial analysis in conservation genetics and modeling of Iranian Salicornia genetic resources
title_fullStr Application of DNA barcodes and spatial analysis in conservation genetics and modeling of Iranian Salicornia genetic resources
title_full_unstemmed Application of DNA barcodes and spatial analysis in conservation genetics and modeling of Iranian Salicornia genetic resources
title_short Application of DNA barcodes and spatial analysis in conservation genetics and modeling of Iranian Salicornia genetic resources
title_sort application of dna barcodes and spatial analysis in conservation genetics and modeling of iranian salicornia genetic resources
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8064562/
https://www.ncbi.nlm.nih.gov/pubmed/33891613
http://dx.doi.org/10.1371/journal.pone.0241162
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