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Application of DNA barcodes and spatial analysis in conservation genetics and modeling of Iranian Salicornia genetic resources
Iran is one of the origins of some Salicornia species. Nevertheless, comprehensive research has not been conducted on genetic potential, distribution, selection of populations, and the economic utilization of Salicornia in Iran. In the current study, Salicornia was collected based on the previous da...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8064562/ https://www.ncbi.nlm.nih.gov/pubmed/33891613 http://dx.doi.org/10.1371/journal.pone.0241162 |
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author | Zeinalabedini, Mehrshad Khoshkholgh Sima, Nayer Azam Ghaffari, Mohammad Reza Ebadi, Ali Farsi, Maryam |
author_facet | Zeinalabedini, Mehrshad Khoshkholgh Sima, Nayer Azam Ghaffari, Mohammad Reza Ebadi, Ali Farsi, Maryam |
author_sort | Zeinalabedini, Mehrshad |
collection | PubMed |
description | Iran is one of the origins of some Salicornia species. Nevertheless, comprehensive research has not been conducted on genetic potential, distribution, selection of populations, and the economic utilization of Salicornia in Iran. In the current study, Salicornia was collected based on the previous data available for 26 different geographical locations of provinces in Iran. We examined Salicornia plants’ universality DNA barcodes, including rbcL, matK, trnH-psbA, and ITS, and their species identification abilities and identified six species groups. Subsequently, accurate modeling of distributed areas was provided with MAXENT and highlighted the valuable information on the diversity of specific geographical regions, conservation status of existing species, prioritization of conservation areas, and selection of Agro-Ecological areas. Together, this type of integrative study will provide useful information for managing and utilizing Salicornia genetic resources in Iran. |
format | Online Article Text |
id | pubmed-8064562 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-80645622021-05-04 Application of DNA barcodes and spatial analysis in conservation genetics and modeling of Iranian Salicornia genetic resources Zeinalabedini, Mehrshad Khoshkholgh Sima, Nayer Azam Ghaffari, Mohammad Reza Ebadi, Ali Farsi, Maryam PLoS One Research Article Iran is one of the origins of some Salicornia species. Nevertheless, comprehensive research has not been conducted on genetic potential, distribution, selection of populations, and the economic utilization of Salicornia in Iran. In the current study, Salicornia was collected based on the previous data available for 26 different geographical locations of provinces in Iran. We examined Salicornia plants’ universality DNA barcodes, including rbcL, matK, trnH-psbA, and ITS, and their species identification abilities and identified six species groups. Subsequently, accurate modeling of distributed areas was provided with MAXENT and highlighted the valuable information on the diversity of specific geographical regions, conservation status of existing species, prioritization of conservation areas, and selection of Agro-Ecological areas. Together, this type of integrative study will provide useful information for managing and utilizing Salicornia genetic resources in Iran. Public Library of Science 2021-04-23 /pmc/articles/PMC8064562/ /pubmed/33891613 http://dx.doi.org/10.1371/journal.pone.0241162 Text en © 2021 Zeinalabedini et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Zeinalabedini, Mehrshad Khoshkholgh Sima, Nayer Azam Ghaffari, Mohammad Reza Ebadi, Ali Farsi, Maryam Application of DNA barcodes and spatial analysis in conservation genetics and modeling of Iranian Salicornia genetic resources |
title | Application of DNA barcodes and spatial analysis in conservation genetics and modeling of Iranian Salicornia genetic resources |
title_full | Application of DNA barcodes and spatial analysis in conservation genetics and modeling of Iranian Salicornia genetic resources |
title_fullStr | Application of DNA barcodes and spatial analysis in conservation genetics and modeling of Iranian Salicornia genetic resources |
title_full_unstemmed | Application of DNA barcodes and spatial analysis in conservation genetics and modeling of Iranian Salicornia genetic resources |
title_short | Application of DNA barcodes and spatial analysis in conservation genetics and modeling of Iranian Salicornia genetic resources |
title_sort | application of dna barcodes and spatial analysis in conservation genetics and modeling of iranian salicornia genetic resources |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8064562/ https://www.ncbi.nlm.nih.gov/pubmed/33891613 http://dx.doi.org/10.1371/journal.pone.0241162 |
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