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Comprehensive coverage of human last meal components revealed by a forensic DNA metabarcoding approach

Stomach content analyses are a valuable tool in human forensic science to interpret perimortem events. While the identification of food components of plant and animal origin has traditionally been conducted by macro- and microscopical approaches in case of incomplete digestion, molecular methods pro...

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Autores principales: Schneider, Judith, Mas-Carrió, Eduard, Jan, Catherine, Miquel, Christian, Taberlet, Pierre, Michaud, Katarzyna, Fumagalli, Luca
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8065038/
https://www.ncbi.nlm.nih.gov/pubmed/33893381
http://dx.doi.org/10.1038/s41598-021-88418-x
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author Schneider, Judith
Mas-Carrió, Eduard
Jan, Catherine
Miquel, Christian
Taberlet, Pierre
Michaud, Katarzyna
Fumagalli, Luca
author_facet Schneider, Judith
Mas-Carrió, Eduard
Jan, Catherine
Miquel, Christian
Taberlet, Pierre
Michaud, Katarzyna
Fumagalli, Luca
author_sort Schneider, Judith
collection PubMed
description Stomach content analyses are a valuable tool in human forensic science to interpret perimortem events. While the identification of food components of plant and animal origin has traditionally been conducted by macro- and microscopical approaches in case of incomplete digestion, molecular methods provide the potential to increase sensitivity and taxonomic resolution. In particular, DNA metabarcoding (PCR-amplification and next generation sequencing of complex DNA mixtures) has seen a rapid growth in the field of wildlife ecology to assess species’ diets from faecal and gastric samples. Despite clear advantages, molecular approaches have not yet been established in routine human forensics to investigate the last meal components of deceased persons. In this pilot study we applied for the first time a DNA metabarcoding approach to assess both plant and vertebrate components of 48 human stomach content samples taken during medicolegal autopsies. We obtained a final dataset with 34 vertebrate and 124 vegetal unique sequences, that were clustered to 9 and 33 operational taxonomic units (OTUs), respectively. Our results suggest that this approach can provide crucial information about circumstances preceding death, and open promising perspectives for biomedical dietary surveys based on digested food items found in the gastrointestinal tract.
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spelling pubmed-80650382021-04-27 Comprehensive coverage of human last meal components revealed by a forensic DNA metabarcoding approach Schneider, Judith Mas-Carrió, Eduard Jan, Catherine Miquel, Christian Taberlet, Pierre Michaud, Katarzyna Fumagalli, Luca Sci Rep Article Stomach content analyses are a valuable tool in human forensic science to interpret perimortem events. While the identification of food components of plant and animal origin has traditionally been conducted by macro- and microscopical approaches in case of incomplete digestion, molecular methods provide the potential to increase sensitivity and taxonomic resolution. In particular, DNA metabarcoding (PCR-amplification and next generation sequencing of complex DNA mixtures) has seen a rapid growth in the field of wildlife ecology to assess species’ diets from faecal and gastric samples. Despite clear advantages, molecular approaches have not yet been established in routine human forensics to investigate the last meal components of deceased persons. In this pilot study we applied for the first time a DNA metabarcoding approach to assess both plant and vertebrate components of 48 human stomach content samples taken during medicolegal autopsies. We obtained a final dataset with 34 vertebrate and 124 vegetal unique sequences, that were clustered to 9 and 33 operational taxonomic units (OTUs), respectively. Our results suggest that this approach can provide crucial information about circumstances preceding death, and open promising perspectives for biomedical dietary surveys based on digested food items found in the gastrointestinal tract. Nature Publishing Group UK 2021-04-23 /pmc/articles/PMC8065038/ /pubmed/33893381 http://dx.doi.org/10.1038/s41598-021-88418-x Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Schneider, Judith
Mas-Carrió, Eduard
Jan, Catherine
Miquel, Christian
Taberlet, Pierre
Michaud, Katarzyna
Fumagalli, Luca
Comprehensive coverage of human last meal components revealed by a forensic DNA metabarcoding approach
title Comprehensive coverage of human last meal components revealed by a forensic DNA metabarcoding approach
title_full Comprehensive coverage of human last meal components revealed by a forensic DNA metabarcoding approach
title_fullStr Comprehensive coverage of human last meal components revealed by a forensic DNA metabarcoding approach
title_full_unstemmed Comprehensive coverage of human last meal components revealed by a forensic DNA metabarcoding approach
title_short Comprehensive coverage of human last meal components revealed by a forensic DNA metabarcoding approach
title_sort comprehensive coverage of human last meal components revealed by a forensic dna metabarcoding approach
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8065038/
https://www.ncbi.nlm.nih.gov/pubmed/33893381
http://dx.doi.org/10.1038/s41598-021-88418-x
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