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CRISPR-based genome editing in primary human pancreatic islet cells

Gene targeting studies in primary human islets could advance our understanding of mechanisms driving diabetes pathogenesis. Here, we demonstrate successful genome editing in primary human islets using clustered regularly interspaced short palindromic repeats (CRISPR) and CRISPR-associated protein 9...

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Autores principales: Bevacqua, Romina J., Dai, Xiaoqing, Lam, Jonathan Y., Gu, Xueying, Friedlander, Mollie S. H., Tellez, Krissie, Miguel-Escalada, Irene, Bonàs-Guarch, Silvia, Atla, Goutham, Zhao, Weichen, Kim, Seung Hyun, Dominguez, Antonia A., Qi, Lei S., Ferrer, Jorge, MacDonald, Patrick E., Kim, Seung K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8065166/
https://www.ncbi.nlm.nih.gov/pubmed/33893274
http://dx.doi.org/10.1038/s41467-021-22651-w
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author Bevacqua, Romina J.
Dai, Xiaoqing
Lam, Jonathan Y.
Gu, Xueying
Friedlander, Mollie S. H.
Tellez, Krissie
Miguel-Escalada, Irene
Bonàs-Guarch, Silvia
Atla, Goutham
Zhao, Weichen
Kim, Seung Hyun
Dominguez, Antonia A.
Qi, Lei S.
Ferrer, Jorge
MacDonald, Patrick E.
Kim, Seung K.
author_facet Bevacqua, Romina J.
Dai, Xiaoqing
Lam, Jonathan Y.
Gu, Xueying
Friedlander, Mollie S. H.
Tellez, Krissie
Miguel-Escalada, Irene
Bonàs-Guarch, Silvia
Atla, Goutham
Zhao, Weichen
Kim, Seung Hyun
Dominguez, Antonia A.
Qi, Lei S.
Ferrer, Jorge
MacDonald, Patrick E.
Kim, Seung K.
author_sort Bevacqua, Romina J.
collection PubMed
description Gene targeting studies in primary human islets could advance our understanding of mechanisms driving diabetes pathogenesis. Here, we demonstrate successful genome editing in primary human islets using clustered regularly interspaced short palindromic repeats (CRISPR) and CRISPR-associated protein 9 (Cas9). CRISPR-based targeting efficiently mutated protein-coding exons, resulting in acute loss of islet β-cell regulators, like the transcription factor PDX1 and the K(ATP) channel subunit KIR6.2, accompanied by impaired β-cell regulation and function. CRISPR targeting of non-coding DNA harboring type 2 diabetes (T2D) risk variants revealed changes in ABCC8, SIX2 and SIX3 expression, and impaired β-cell function, thereby linking regulatory elements in these target genes to T2D genetic susceptibility. Advances here establish a paradigm for genetic studies in human islet cells, and reveal regulatory and genetic mechanisms linking non-coding variants to human diabetes risk.
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spelling pubmed-80651662021-05-11 CRISPR-based genome editing in primary human pancreatic islet cells Bevacqua, Romina J. Dai, Xiaoqing Lam, Jonathan Y. Gu, Xueying Friedlander, Mollie S. H. Tellez, Krissie Miguel-Escalada, Irene Bonàs-Guarch, Silvia Atla, Goutham Zhao, Weichen Kim, Seung Hyun Dominguez, Antonia A. Qi, Lei S. Ferrer, Jorge MacDonald, Patrick E. Kim, Seung K. Nat Commun Article Gene targeting studies in primary human islets could advance our understanding of mechanisms driving diabetes pathogenesis. Here, we demonstrate successful genome editing in primary human islets using clustered regularly interspaced short palindromic repeats (CRISPR) and CRISPR-associated protein 9 (Cas9). CRISPR-based targeting efficiently mutated protein-coding exons, resulting in acute loss of islet β-cell regulators, like the transcription factor PDX1 and the K(ATP) channel subunit KIR6.2, accompanied by impaired β-cell regulation and function. CRISPR targeting of non-coding DNA harboring type 2 diabetes (T2D) risk variants revealed changes in ABCC8, SIX2 and SIX3 expression, and impaired β-cell function, thereby linking regulatory elements in these target genes to T2D genetic susceptibility. Advances here establish a paradigm for genetic studies in human islet cells, and reveal regulatory and genetic mechanisms linking non-coding variants to human diabetes risk. Nature Publishing Group UK 2021-04-23 /pmc/articles/PMC8065166/ /pubmed/33893274 http://dx.doi.org/10.1038/s41467-021-22651-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Bevacqua, Romina J.
Dai, Xiaoqing
Lam, Jonathan Y.
Gu, Xueying
Friedlander, Mollie S. H.
Tellez, Krissie
Miguel-Escalada, Irene
Bonàs-Guarch, Silvia
Atla, Goutham
Zhao, Weichen
Kim, Seung Hyun
Dominguez, Antonia A.
Qi, Lei S.
Ferrer, Jorge
MacDonald, Patrick E.
Kim, Seung K.
CRISPR-based genome editing in primary human pancreatic islet cells
title CRISPR-based genome editing in primary human pancreatic islet cells
title_full CRISPR-based genome editing in primary human pancreatic islet cells
title_fullStr CRISPR-based genome editing in primary human pancreatic islet cells
title_full_unstemmed CRISPR-based genome editing in primary human pancreatic islet cells
title_short CRISPR-based genome editing in primary human pancreatic islet cells
title_sort crispr-based genome editing in primary human pancreatic islet cells
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8065166/
https://www.ncbi.nlm.nih.gov/pubmed/33893274
http://dx.doi.org/10.1038/s41467-021-22651-w
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