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An Automatic Ontology-Based Approach to Support Logical Representation of Observable and Measurable Data for Healthy Lifestyle Management: Proof-of-Concept Study

BACKGROUND: Lifestyle diseases, because of adverse health behavior, are the foremost cause of death worldwide. An eCoach system may encourage individuals to lead a healthy lifestyle with early health risk prediction, personalized recommendation generation, and goal evaluation. Such an eCoach system...

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Autores principales: Chatterjee, Ayan, Prinz, Andreas, Gerdes, Martin, Martinez, Santiago
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8065560/
https://www.ncbi.nlm.nih.gov/pubmed/33835031
http://dx.doi.org/10.2196/24656
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author Chatterjee, Ayan
Prinz, Andreas
Gerdes, Martin
Martinez, Santiago
author_facet Chatterjee, Ayan
Prinz, Andreas
Gerdes, Martin
Martinez, Santiago
author_sort Chatterjee, Ayan
collection PubMed
description BACKGROUND: Lifestyle diseases, because of adverse health behavior, are the foremost cause of death worldwide. An eCoach system may encourage individuals to lead a healthy lifestyle with early health risk prediction, personalized recommendation generation, and goal evaluation. Such an eCoach system needs to collect and transform distributed heterogenous health and wellness data into meaningful information to train an artificially intelligent health risk prediction model. However, it may produce a data compatibility dilemma. Our proposed eHealth ontology can increase interoperability between different heterogeneous networks, provide situation awareness, help in data integration, and discover inferred knowledge. This “proof-of-concept” study will help sensor, questionnaire, and interview data to be more organized for health risk prediction and personalized recommendation generation targeting obesity as a study case. OBJECTIVE: The aim of this study is to develop an OWL-based ontology (UiA eHealth Ontology/UiAeHo) model to annotate personal, physiological, behavioral, and contextual data from heterogeneous sources (sensor, questionnaire, and interview), followed by structuring and standardizing of diverse descriptions to generate meaningful, practical, personalized, and contextual lifestyle recommendations based on the defined rules. METHODS: We have developed a simulator to collect dummy personal, physiological, behavioral, and contextual data related to artificial participants involved in health monitoring. We have integrated the concepts of “Semantic Sensor Network Ontology” and “Systematized Nomenclature of Medicine—Clinical Terms” to develop our proposed eHealth ontology. The ontology has been created using Protégé (version 5.x). We have used the Java-based “Jena Framework” (version 3.16) for building a semantic web application that includes resource description framework (RDF) application programming interface (API), OWL API, native tuple store (tuple database), and the SPARQL (Simple Protocol and RDF Query Language) query engine. The logical and structural consistency of the proposed ontology has been evaluated with the “HermiT 1.4.3.x” ontology reasoner available in Protégé 5.x. RESULTS: The proposed ontology has been implemented for the study case “obesity.” However, it can be extended further to other lifestyle diseases. “UiA eHealth Ontology” has been constructed using logical axioms, declaration axioms, classes, object properties, and data properties. The ontology can be visualized with “Owl Viz,” and the formal representation has been used to infer a participant’s health status using the “HermiT” reasoner. We have also developed a module for ontology verification that behaves like a rule-based decision support system to predict the probability for health risk, based on the evaluation of the results obtained from SPARQL queries. Furthermore, we discussed the potential lifestyle recommendation generation plan against adverse behavioral risks. CONCLUSIONS: This study has led to the creation of a meaningful, context-specific ontology to model massive, unintuitive, raw, unstructured observations for health and wellness data (eg, sensors, interviews, questionnaires) and to annotate them with semantic metadata to create a compact, intelligible abstraction for health risk predictions for individualized recommendation generation.
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spelling pubmed-80655602021-05-07 An Automatic Ontology-Based Approach to Support Logical Representation of Observable and Measurable Data for Healthy Lifestyle Management: Proof-of-Concept Study Chatterjee, Ayan Prinz, Andreas Gerdes, Martin Martinez, Santiago J Med Internet Res Original Paper BACKGROUND: Lifestyle diseases, because of adverse health behavior, are the foremost cause of death worldwide. An eCoach system may encourage individuals to lead a healthy lifestyle with early health risk prediction, personalized recommendation generation, and goal evaluation. Such an eCoach system needs to collect and transform distributed heterogenous health and wellness data into meaningful information to train an artificially intelligent health risk prediction model. However, it may produce a data compatibility dilemma. Our proposed eHealth ontology can increase interoperability between different heterogeneous networks, provide situation awareness, help in data integration, and discover inferred knowledge. This “proof-of-concept” study will help sensor, questionnaire, and interview data to be more organized for health risk prediction and personalized recommendation generation targeting obesity as a study case. OBJECTIVE: The aim of this study is to develop an OWL-based ontology (UiA eHealth Ontology/UiAeHo) model to annotate personal, physiological, behavioral, and contextual data from heterogeneous sources (sensor, questionnaire, and interview), followed by structuring and standardizing of diverse descriptions to generate meaningful, practical, personalized, and contextual lifestyle recommendations based on the defined rules. METHODS: We have developed a simulator to collect dummy personal, physiological, behavioral, and contextual data related to artificial participants involved in health monitoring. We have integrated the concepts of “Semantic Sensor Network Ontology” and “Systematized Nomenclature of Medicine—Clinical Terms” to develop our proposed eHealth ontology. The ontology has been created using Protégé (version 5.x). We have used the Java-based “Jena Framework” (version 3.16) for building a semantic web application that includes resource description framework (RDF) application programming interface (API), OWL API, native tuple store (tuple database), and the SPARQL (Simple Protocol and RDF Query Language) query engine. The logical and structural consistency of the proposed ontology has been evaluated with the “HermiT 1.4.3.x” ontology reasoner available in Protégé 5.x. RESULTS: The proposed ontology has been implemented for the study case “obesity.” However, it can be extended further to other lifestyle diseases. “UiA eHealth Ontology” has been constructed using logical axioms, declaration axioms, classes, object properties, and data properties. The ontology can be visualized with “Owl Viz,” and the formal representation has been used to infer a participant’s health status using the “HermiT” reasoner. We have also developed a module for ontology verification that behaves like a rule-based decision support system to predict the probability for health risk, based on the evaluation of the results obtained from SPARQL queries. Furthermore, we discussed the potential lifestyle recommendation generation plan against adverse behavioral risks. CONCLUSIONS: This study has led to the creation of a meaningful, context-specific ontology to model massive, unintuitive, raw, unstructured observations for health and wellness data (eg, sensors, interviews, questionnaires) and to annotate them with semantic metadata to create a compact, intelligible abstraction for health risk predictions for individualized recommendation generation. JMIR Publications 2021-04-09 /pmc/articles/PMC8065560/ /pubmed/33835031 http://dx.doi.org/10.2196/24656 Text en ©Ayan Chatterjee, Andreas Prinz, Martin Gerdes, Santiago Martinez. Originally published in the Journal of Medical Internet Research (http://www.jmir.org), 09.04.2021. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in the Journal of Medical Internet Research, is properly cited. The complete bibliographic information, a link to the original publication on http://www.jmir.org/, as well as this copyright and license information must be included.
spellingShingle Original Paper
Chatterjee, Ayan
Prinz, Andreas
Gerdes, Martin
Martinez, Santiago
An Automatic Ontology-Based Approach to Support Logical Representation of Observable and Measurable Data for Healthy Lifestyle Management: Proof-of-Concept Study
title An Automatic Ontology-Based Approach to Support Logical Representation of Observable and Measurable Data for Healthy Lifestyle Management: Proof-of-Concept Study
title_full An Automatic Ontology-Based Approach to Support Logical Representation of Observable and Measurable Data for Healthy Lifestyle Management: Proof-of-Concept Study
title_fullStr An Automatic Ontology-Based Approach to Support Logical Representation of Observable and Measurable Data for Healthy Lifestyle Management: Proof-of-Concept Study
title_full_unstemmed An Automatic Ontology-Based Approach to Support Logical Representation of Observable and Measurable Data for Healthy Lifestyle Management: Proof-of-Concept Study
title_short An Automatic Ontology-Based Approach to Support Logical Representation of Observable and Measurable Data for Healthy Lifestyle Management: Proof-of-Concept Study
title_sort automatic ontology-based approach to support logical representation of observable and measurable data for healthy lifestyle management: proof-of-concept study
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8065560/
https://www.ncbi.nlm.nih.gov/pubmed/33835031
http://dx.doi.org/10.2196/24656
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