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A Systematic Review of Asthma Phenotypes Derived by Data-Driven Methods

Classification of asthma phenotypes has a potentially relevant impact on the clinical management of the disease. Methods for statistical classification without a priori assumptions (data-driven approaches) may contribute to developing a better comprehension of trait heterogeneity in disease phenotyp...

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Autores principales: Cunha, Francisco, Amaral, Rita, Jacinto, Tiago, Sousa-Pinto, Bernardo, Fonseca, João A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8066118/
https://www.ncbi.nlm.nih.gov/pubmed/33918233
http://dx.doi.org/10.3390/diagnostics11040644
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author Cunha, Francisco
Amaral, Rita
Jacinto, Tiago
Sousa-Pinto, Bernardo
Fonseca, João A.
author_facet Cunha, Francisco
Amaral, Rita
Jacinto, Tiago
Sousa-Pinto, Bernardo
Fonseca, João A.
author_sort Cunha, Francisco
collection PubMed
description Classification of asthma phenotypes has a potentially relevant impact on the clinical management of the disease. Methods for statistical classification without a priori assumptions (data-driven approaches) may contribute to developing a better comprehension of trait heterogeneity in disease phenotyping. This study aimed to summarize and characterize asthma phenotypes derived by data-driven methods. We performed a systematic review using three scientific databases, following Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) criteria. We included studies reporting adult asthma phenotypes derived by data-driven methods using easily accessible variables in clinical practice. Two independent reviewers assessed studies. The methodological quality of included primary studies was assessed using the ROBINS-I tool. We retrieved 7446 results and included 68 studies of which 65% (n = 44) used data from specialized centers and 53% (n = 36) evaluated the consistency of phenotypes. The most frequent data-driven method was hierarchical cluster analysis (n = 19). Three major asthma-related domains of easily measurable clinical variables used for phenotyping were identified: personal (n = 49), functional (n = 48) and clinical (n = 47). The identified asthma phenotypes varied according to the sample’s characteristics, variables included in the model, and data availability. Overall, the most frequent phenotypes were related to atopy, gender, and severe disease. This review shows a large variability of asthma phenotypes derived from data-driven methods. Further research should include more population-based samples and assess longitudinal consistency of data-driven phenotypes.
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spelling pubmed-80661182021-04-25 A Systematic Review of Asthma Phenotypes Derived by Data-Driven Methods Cunha, Francisco Amaral, Rita Jacinto, Tiago Sousa-Pinto, Bernardo Fonseca, João A. Diagnostics (Basel) Review Classification of asthma phenotypes has a potentially relevant impact on the clinical management of the disease. Methods for statistical classification without a priori assumptions (data-driven approaches) may contribute to developing a better comprehension of trait heterogeneity in disease phenotyping. This study aimed to summarize and characterize asthma phenotypes derived by data-driven methods. We performed a systematic review using three scientific databases, following Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) criteria. We included studies reporting adult asthma phenotypes derived by data-driven methods using easily accessible variables in clinical practice. Two independent reviewers assessed studies. The methodological quality of included primary studies was assessed using the ROBINS-I tool. We retrieved 7446 results and included 68 studies of which 65% (n = 44) used data from specialized centers and 53% (n = 36) evaluated the consistency of phenotypes. The most frequent data-driven method was hierarchical cluster analysis (n = 19). Three major asthma-related domains of easily measurable clinical variables used for phenotyping were identified: personal (n = 49), functional (n = 48) and clinical (n = 47). The identified asthma phenotypes varied according to the sample’s characteristics, variables included in the model, and data availability. Overall, the most frequent phenotypes were related to atopy, gender, and severe disease. This review shows a large variability of asthma phenotypes derived from data-driven methods. Further research should include more population-based samples and assess longitudinal consistency of data-driven phenotypes. MDPI 2021-04-02 /pmc/articles/PMC8066118/ /pubmed/33918233 http://dx.doi.org/10.3390/diagnostics11040644 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Cunha, Francisco
Amaral, Rita
Jacinto, Tiago
Sousa-Pinto, Bernardo
Fonseca, João A.
A Systematic Review of Asthma Phenotypes Derived by Data-Driven Methods
title A Systematic Review of Asthma Phenotypes Derived by Data-Driven Methods
title_full A Systematic Review of Asthma Phenotypes Derived by Data-Driven Methods
title_fullStr A Systematic Review of Asthma Phenotypes Derived by Data-Driven Methods
title_full_unstemmed A Systematic Review of Asthma Phenotypes Derived by Data-Driven Methods
title_short A Systematic Review of Asthma Phenotypes Derived by Data-Driven Methods
title_sort systematic review of asthma phenotypes derived by data-driven methods
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8066118/
https://www.ncbi.nlm.nih.gov/pubmed/33918233
http://dx.doi.org/10.3390/diagnostics11040644
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