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U-Infuse: Democratization of Customizable Deep Learning for Object Detection

Image data is one of the primary sources of ecological data used in biodiversity conservation and management worldwide. However, classifying and interpreting large numbers of images is time and resource expensive, particularly in the context of camera trapping. Deep learning models have been used to...

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Autores principales: Shepley, Andrew, Falzon, Greg, Lawson, Christopher, Meek, Paul, Kwan, Paul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8068121/
https://www.ncbi.nlm.nih.gov/pubmed/33917792
http://dx.doi.org/10.3390/s21082611
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author Shepley, Andrew
Falzon, Greg
Lawson, Christopher
Meek, Paul
Kwan, Paul
author_facet Shepley, Andrew
Falzon, Greg
Lawson, Christopher
Meek, Paul
Kwan, Paul
author_sort Shepley, Andrew
collection PubMed
description Image data is one of the primary sources of ecological data used in biodiversity conservation and management worldwide. However, classifying and interpreting large numbers of images is time and resource expensive, particularly in the context of camera trapping. Deep learning models have been used to achieve this task but are often not suited to specific applications due to their inability to generalise to new environments and inconsistent performance. Models need to be developed for specific species cohorts and environments, but the technical skills required to achieve this are a key barrier to the accessibility of this technology to ecologists. Thus, there is a strong need to democratize access to deep learning technologies by providing an easy-to-use software application allowing non-technical users to train custom object detectors. U-Infuse addresses this issue by providing ecologists with the ability to train customised models using publicly available images and/or their own images without specific technical expertise. Auto-annotation and annotation editing functionalities minimize the constraints of manually annotating and pre-processing large numbers of images. U-Infuse is a free and open-source software solution that supports both multiclass and single class training and object detection, allowing ecologists to access deep learning technologies usually only available to computer scientists, on their own device, customised for their application, without sharing intellectual property or sensitive data. It provides ecological practitioners with the ability to (i) easily achieve object detection within a user-friendly GUI, generating a species distribution report, and other useful statistics, (ii) custom train deep learning models using publicly available and custom training data, (iii) achieve supervised auto-annotation of images for further training, with the benefit of editing annotations to ensure quality datasets. Broad adoption of U-Infuse by ecological practitioners will improve ecological image analysis and processing by allowing significantly more image data to be processed with minimal expenditure of time and resources, particularly for camera trap images. Ease of training and use of transfer learning means domain-specific models can be trained rapidly, and frequently updated without the need for computer science expertise, or data sharing, protecting intellectual property and privacy.
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spelling pubmed-80681212021-04-25 U-Infuse: Democratization of Customizable Deep Learning for Object Detection Shepley, Andrew Falzon, Greg Lawson, Christopher Meek, Paul Kwan, Paul Sensors (Basel) Article Image data is one of the primary sources of ecological data used in biodiversity conservation and management worldwide. However, classifying and interpreting large numbers of images is time and resource expensive, particularly in the context of camera trapping. Deep learning models have been used to achieve this task but are often not suited to specific applications due to their inability to generalise to new environments and inconsistent performance. Models need to be developed for specific species cohorts and environments, but the technical skills required to achieve this are a key barrier to the accessibility of this technology to ecologists. Thus, there is a strong need to democratize access to deep learning technologies by providing an easy-to-use software application allowing non-technical users to train custom object detectors. U-Infuse addresses this issue by providing ecologists with the ability to train customised models using publicly available images and/or their own images without specific technical expertise. Auto-annotation and annotation editing functionalities minimize the constraints of manually annotating and pre-processing large numbers of images. U-Infuse is a free and open-source software solution that supports both multiclass and single class training and object detection, allowing ecologists to access deep learning technologies usually only available to computer scientists, on their own device, customised for their application, without sharing intellectual property or sensitive data. It provides ecological practitioners with the ability to (i) easily achieve object detection within a user-friendly GUI, generating a species distribution report, and other useful statistics, (ii) custom train deep learning models using publicly available and custom training data, (iii) achieve supervised auto-annotation of images for further training, with the benefit of editing annotations to ensure quality datasets. Broad adoption of U-Infuse by ecological practitioners will improve ecological image analysis and processing by allowing significantly more image data to be processed with minimal expenditure of time and resources, particularly for camera trap images. Ease of training and use of transfer learning means domain-specific models can be trained rapidly, and frequently updated without the need for computer science expertise, or data sharing, protecting intellectual property and privacy. MDPI 2021-04-08 /pmc/articles/PMC8068121/ /pubmed/33917792 http://dx.doi.org/10.3390/s21082611 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Shepley, Andrew
Falzon, Greg
Lawson, Christopher
Meek, Paul
Kwan, Paul
U-Infuse: Democratization of Customizable Deep Learning for Object Detection
title U-Infuse: Democratization of Customizable Deep Learning for Object Detection
title_full U-Infuse: Democratization of Customizable Deep Learning for Object Detection
title_fullStr U-Infuse: Democratization of Customizable Deep Learning for Object Detection
title_full_unstemmed U-Infuse: Democratization of Customizable Deep Learning for Object Detection
title_short U-Infuse: Democratization of Customizable Deep Learning for Object Detection
title_sort u-infuse: democratization of customizable deep learning for object detection
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8068121/
https://www.ncbi.nlm.nih.gov/pubmed/33917792
http://dx.doi.org/10.3390/s21082611
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