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Deep Learning Based Instance Segmentation of Titanium Dioxide Particles in the Form of Agglomerates in Scanning Electron Microscopy

The size characterization of particles present in the form of agglomerates in images measured by scanning electron microscopy (SEM) requires a powerful image segmentation tool in order to properly define the boundaries of each particle. In this work, we propose to use an algorithm from the deep stat...

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Detalles Bibliográficos
Autores principales: Monchot, Paul, Coquelin, Loïc, Guerroudj, Khaled, Feltin, Nicolas, Delvallée, Alexandra, Crouzier, Loïc, Fischer, Nicolas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8068950/
https://www.ncbi.nlm.nih.gov/pubmed/33918779
http://dx.doi.org/10.3390/nano11040968
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author Monchot, Paul
Coquelin, Loïc
Guerroudj, Khaled
Feltin, Nicolas
Delvallée, Alexandra
Crouzier, Loïc
Fischer, Nicolas
author_facet Monchot, Paul
Coquelin, Loïc
Guerroudj, Khaled
Feltin, Nicolas
Delvallée, Alexandra
Crouzier, Loïc
Fischer, Nicolas
author_sort Monchot, Paul
collection PubMed
description The size characterization of particles present in the form of agglomerates in images measured by scanning electron microscopy (SEM) requires a powerful image segmentation tool in order to properly define the boundaries of each particle. In this work, we propose to use an algorithm from the deep statistical learning community, the Mask-RCNN, coupled with transfer learning to overcome the problem of generalization of the commonly used image processing methods such as watershed or active contour. Indeed, the adjustment of the parameters of these algorithms is almost systematically necessary and slows down the automation of the processing chain. The Mask-RCNN is adapted here to the case study and we present results obtained on titanium dioxide samples (non-spherical particles) with a level of performance evaluated by different metrics such as the DICE coefficient, which reaches an average value of 0.95 on the test images.
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spelling pubmed-80689502021-04-26 Deep Learning Based Instance Segmentation of Titanium Dioxide Particles in the Form of Agglomerates in Scanning Electron Microscopy Monchot, Paul Coquelin, Loïc Guerroudj, Khaled Feltin, Nicolas Delvallée, Alexandra Crouzier, Loïc Fischer, Nicolas Nanomaterials (Basel) Article The size characterization of particles present in the form of agglomerates in images measured by scanning electron microscopy (SEM) requires a powerful image segmentation tool in order to properly define the boundaries of each particle. In this work, we propose to use an algorithm from the deep statistical learning community, the Mask-RCNN, coupled with transfer learning to overcome the problem of generalization of the commonly used image processing methods such as watershed or active contour. Indeed, the adjustment of the parameters of these algorithms is almost systematically necessary and slows down the automation of the processing chain. The Mask-RCNN is adapted here to the case study and we present results obtained on titanium dioxide samples (non-spherical particles) with a level of performance evaluated by different metrics such as the DICE coefficient, which reaches an average value of 0.95 on the test images. MDPI 2021-04-09 /pmc/articles/PMC8068950/ /pubmed/33918779 http://dx.doi.org/10.3390/nano11040968 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Monchot, Paul
Coquelin, Loïc
Guerroudj, Khaled
Feltin, Nicolas
Delvallée, Alexandra
Crouzier, Loïc
Fischer, Nicolas
Deep Learning Based Instance Segmentation of Titanium Dioxide Particles in the Form of Agglomerates in Scanning Electron Microscopy
title Deep Learning Based Instance Segmentation of Titanium Dioxide Particles in the Form of Agglomerates in Scanning Electron Microscopy
title_full Deep Learning Based Instance Segmentation of Titanium Dioxide Particles in the Form of Agglomerates in Scanning Electron Microscopy
title_fullStr Deep Learning Based Instance Segmentation of Titanium Dioxide Particles in the Form of Agglomerates in Scanning Electron Microscopy
title_full_unstemmed Deep Learning Based Instance Segmentation of Titanium Dioxide Particles in the Form of Agglomerates in Scanning Electron Microscopy
title_short Deep Learning Based Instance Segmentation of Titanium Dioxide Particles in the Form of Agglomerates in Scanning Electron Microscopy
title_sort deep learning based instance segmentation of titanium dioxide particles in the form of agglomerates in scanning electron microscopy
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8068950/
https://www.ncbi.nlm.nih.gov/pubmed/33918779
http://dx.doi.org/10.3390/nano11040968
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