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A New Era of Neuro-Oncology Research Pioneered by Multi-Omics Analysis and Machine Learning

Although the incidence of central nervous system (CNS) cancers is not high, it significantly reduces a patient’s quality of life and results in high mortality rates. A low incidence also means a low number of cases, which in turn means a low amount of information. To compensate, researchers have tri...

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Autores principales: Takahashi, Satoshi, Takahashi, Masamichi, Tanaka, Shota, Takayanagi, Shunsaku, Takami, Hirokazu, Yamazawa, Erika, Nambu, Shohei, Miyake, Mototaka, Satomi, Kaishi, Ichimura, Koichi, Narita, Yoshitaka, Hamamoto, Ryuji
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8070530/
https://www.ncbi.nlm.nih.gov/pubmed/33921457
http://dx.doi.org/10.3390/biom11040565
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author Takahashi, Satoshi
Takahashi, Masamichi
Tanaka, Shota
Takayanagi, Shunsaku
Takami, Hirokazu
Yamazawa, Erika
Nambu, Shohei
Miyake, Mototaka
Satomi, Kaishi
Ichimura, Koichi
Narita, Yoshitaka
Hamamoto, Ryuji
author_facet Takahashi, Satoshi
Takahashi, Masamichi
Tanaka, Shota
Takayanagi, Shunsaku
Takami, Hirokazu
Yamazawa, Erika
Nambu, Shohei
Miyake, Mototaka
Satomi, Kaishi
Ichimura, Koichi
Narita, Yoshitaka
Hamamoto, Ryuji
author_sort Takahashi, Satoshi
collection PubMed
description Although the incidence of central nervous system (CNS) cancers is not high, it significantly reduces a patient’s quality of life and results in high mortality rates. A low incidence also means a low number of cases, which in turn means a low amount of information. To compensate, researchers have tried to increase the amount of information available from a single test using high-throughput technologies. This approach, referred to as single-omics analysis, has only been partially successful as one type of data may not be able to appropriately describe all the characteristics of a tumor. It is presently unclear what type of data can describe a particular clinical situation. One way to solve this problem is to use multi-omics data. When using many types of data, a selected data type or a combination of them may effectively resolve a clinical question. Hence, we conducted a comprehensive survey of papers in the field of neuro-oncology that used multi-omics data for analysis and found that most of the papers utilized machine learning techniques. This fact shows that it is useful to utilize machine learning techniques in multi-omics analysis. In this review, we discuss the current status of multi-omics analysis in the field of neuro-oncology and the importance of using machine learning techniques.
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spelling pubmed-80705302021-04-26 A New Era of Neuro-Oncology Research Pioneered by Multi-Omics Analysis and Machine Learning Takahashi, Satoshi Takahashi, Masamichi Tanaka, Shota Takayanagi, Shunsaku Takami, Hirokazu Yamazawa, Erika Nambu, Shohei Miyake, Mototaka Satomi, Kaishi Ichimura, Koichi Narita, Yoshitaka Hamamoto, Ryuji Biomolecules Review Although the incidence of central nervous system (CNS) cancers is not high, it significantly reduces a patient’s quality of life and results in high mortality rates. A low incidence also means a low number of cases, which in turn means a low amount of information. To compensate, researchers have tried to increase the amount of information available from a single test using high-throughput technologies. This approach, referred to as single-omics analysis, has only been partially successful as one type of data may not be able to appropriately describe all the characteristics of a tumor. It is presently unclear what type of data can describe a particular clinical situation. One way to solve this problem is to use multi-omics data. When using many types of data, a selected data type or a combination of them may effectively resolve a clinical question. Hence, we conducted a comprehensive survey of papers in the field of neuro-oncology that used multi-omics data for analysis and found that most of the papers utilized machine learning techniques. This fact shows that it is useful to utilize machine learning techniques in multi-omics analysis. In this review, we discuss the current status of multi-omics analysis in the field of neuro-oncology and the importance of using machine learning techniques. MDPI 2021-04-12 /pmc/articles/PMC8070530/ /pubmed/33921457 http://dx.doi.org/10.3390/biom11040565 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Takahashi, Satoshi
Takahashi, Masamichi
Tanaka, Shota
Takayanagi, Shunsaku
Takami, Hirokazu
Yamazawa, Erika
Nambu, Shohei
Miyake, Mototaka
Satomi, Kaishi
Ichimura, Koichi
Narita, Yoshitaka
Hamamoto, Ryuji
A New Era of Neuro-Oncology Research Pioneered by Multi-Omics Analysis and Machine Learning
title A New Era of Neuro-Oncology Research Pioneered by Multi-Omics Analysis and Machine Learning
title_full A New Era of Neuro-Oncology Research Pioneered by Multi-Omics Analysis and Machine Learning
title_fullStr A New Era of Neuro-Oncology Research Pioneered by Multi-Omics Analysis and Machine Learning
title_full_unstemmed A New Era of Neuro-Oncology Research Pioneered by Multi-Omics Analysis and Machine Learning
title_short A New Era of Neuro-Oncology Research Pioneered by Multi-Omics Analysis and Machine Learning
title_sort new era of neuro-oncology research pioneered by multi-omics analysis and machine learning
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8070530/
https://www.ncbi.nlm.nih.gov/pubmed/33921457
http://dx.doi.org/10.3390/biom11040565
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