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Identification of Expression Patterns and Potential Prognostic Significance of m(5)C-Related Regulators in Head and Neck Squamous Cell Carcinoma
5-Methylcytosine (m(5)C) methylation is a major epigenetic technique of RNA modification and is dynamically mediated by m(5)C “writers,” “erasers,” and “readers.” m(5)C RNA modification and its regulators are implicated in the onset and development of many tumors, but their roles in head and neck sq...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8072008/ https://www.ncbi.nlm.nih.gov/pubmed/33912441 http://dx.doi.org/10.3389/fonc.2021.592107 |
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author | Han, Zhenyuan Yang, Biao Wang, Yu Zeng, Xiuxia Tian, Zhen |
author_facet | Han, Zhenyuan Yang, Biao Wang, Yu Zeng, Xiuxia Tian, Zhen |
author_sort | Han, Zhenyuan |
collection | PubMed |
description | 5-Methylcytosine (m(5)C) methylation is a major epigenetic technique of RNA modification and is dynamically mediated by m(5)C “writers,” “erasers,” and “readers.” m(5)C RNA modification and its regulators are implicated in the onset and development of many tumors, but their roles in head and neck squamous cell carcinoma (HNSCC) have not yet been completely elucidated. In this study, we examined expression patterns of core m(5)C regulators in the publicly available HNSCC cohort via bioinformatic methods. The differentially expressed m(5)C regulators could divide the HNSCC cohort into four subgroups with distinct prognostic characteristics. Furthermore, a three-gene expression signature model, comprised of NSUN5, DNMT1, and DNMT3A, was established to identify individuals with a high or low risk of HNSCC. To explore the underlying mechanism in the prognosis of HNSCC, screening of differentially expressed genes, followed by the analysis of functional and pathway enrichment, from individuals with high- or low-risk HNSCC was performed. The results revealed a critical role for m(5)C RNA modification in two aspects of HNSCC: (1) dynamic m(5)C modification contributes to the regulation of HNSCC progression and (2) expression patterns of NSUN5, DNMT1, and DNMT3A help to predict the prognosis of HNSCC. |
format | Online Article Text |
id | pubmed-8072008 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-80720082021-04-27 Identification of Expression Patterns and Potential Prognostic Significance of m(5)C-Related Regulators in Head and Neck Squamous Cell Carcinoma Han, Zhenyuan Yang, Biao Wang, Yu Zeng, Xiuxia Tian, Zhen Front Oncol Oncology 5-Methylcytosine (m(5)C) methylation is a major epigenetic technique of RNA modification and is dynamically mediated by m(5)C “writers,” “erasers,” and “readers.” m(5)C RNA modification and its regulators are implicated in the onset and development of many tumors, but their roles in head and neck squamous cell carcinoma (HNSCC) have not yet been completely elucidated. In this study, we examined expression patterns of core m(5)C regulators in the publicly available HNSCC cohort via bioinformatic methods. The differentially expressed m(5)C regulators could divide the HNSCC cohort into four subgroups with distinct prognostic characteristics. Furthermore, a three-gene expression signature model, comprised of NSUN5, DNMT1, and DNMT3A, was established to identify individuals with a high or low risk of HNSCC. To explore the underlying mechanism in the prognosis of HNSCC, screening of differentially expressed genes, followed by the analysis of functional and pathway enrichment, from individuals with high- or low-risk HNSCC was performed. The results revealed a critical role for m(5)C RNA modification in two aspects of HNSCC: (1) dynamic m(5)C modification contributes to the regulation of HNSCC progression and (2) expression patterns of NSUN5, DNMT1, and DNMT3A help to predict the prognosis of HNSCC. Frontiers Media S.A. 2021-04-12 /pmc/articles/PMC8072008/ /pubmed/33912441 http://dx.doi.org/10.3389/fonc.2021.592107 Text en Copyright © 2021 Han, Yang, Wang, Zeng and Tian. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Han, Zhenyuan Yang, Biao Wang, Yu Zeng, Xiuxia Tian, Zhen Identification of Expression Patterns and Potential Prognostic Significance of m(5)C-Related Regulators in Head and Neck Squamous Cell Carcinoma |
title | Identification of Expression Patterns and Potential Prognostic Significance of m(5)C-Related Regulators in Head and Neck Squamous Cell Carcinoma |
title_full | Identification of Expression Patterns and Potential Prognostic Significance of m(5)C-Related Regulators in Head and Neck Squamous Cell Carcinoma |
title_fullStr | Identification of Expression Patterns and Potential Prognostic Significance of m(5)C-Related Regulators in Head and Neck Squamous Cell Carcinoma |
title_full_unstemmed | Identification of Expression Patterns and Potential Prognostic Significance of m(5)C-Related Regulators in Head and Neck Squamous Cell Carcinoma |
title_short | Identification of Expression Patterns and Potential Prognostic Significance of m(5)C-Related Regulators in Head and Neck Squamous Cell Carcinoma |
title_sort | identification of expression patterns and potential prognostic significance of m(5)c-related regulators in head and neck squamous cell carcinoma |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8072008/ https://www.ncbi.nlm.nih.gov/pubmed/33912441 http://dx.doi.org/10.3389/fonc.2021.592107 |
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