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Integrated Collection of Stem Cell Bank Data, a Data Portal for Standardized Stem Cell Information
The past decade has witnessed an extremely rapid increase in the number of newly established stem cell lines. However, due to the lack of a standardized format, data exchange among stem cell line resources has been challenging, and no system can search all stem cell lines across resources worldwide....
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8072026/ https://www.ncbi.nlm.nih.gov/pubmed/33740463 http://dx.doi.org/10.1016/j.stemcr.2021.02.014 |
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author | Chen, Ying Sakurai, Kunie Maeda, Sumihiro Masui, Tohru Okano, Hideyuki Dewender, Johannes Seltmann, Stefanie Kurtz, Andreas Masuya, Hiroshi Nakamura, Yukio Sheldon, Michael Schneider, Juliane Stacey, Glyn N. Panina, Yulia Fujibuchi, Wataru |
author_facet | Chen, Ying Sakurai, Kunie Maeda, Sumihiro Masui, Tohru Okano, Hideyuki Dewender, Johannes Seltmann, Stefanie Kurtz, Andreas Masuya, Hiroshi Nakamura, Yukio Sheldon, Michael Schneider, Juliane Stacey, Glyn N. Panina, Yulia Fujibuchi, Wataru |
author_sort | Chen, Ying |
collection | PubMed |
description | The past decade has witnessed an extremely rapid increase in the number of newly established stem cell lines. However, due to the lack of a standardized format, data exchange among stem cell line resources has been challenging, and no system can search all stem cell lines across resources worldwide. To solve this problem, we have developed the Integrated Collection of Stem Cell Bank data (ICSCB) (http://icscb.stemcellinformatics.org/), the largest database search portal for stem cell line information, based on the standardized data items and terms of the MIACARM framework. Currently, ICSCB can retrieve >16,000 cell lines from four major data resources in Europe, Japan, and the United States. ICSCB is automatically updated to provide the latest cell line information, and its integrative search helps users collect cell line information for over 1,000 diseases, including many rare diseases worldwide, which has been a formidable task, thereby distinguishing itself from other database search portals. |
format | Online Article Text |
id | pubmed-8072026 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-80720262021-04-29 Integrated Collection of Stem Cell Bank Data, a Data Portal for Standardized Stem Cell Information Chen, Ying Sakurai, Kunie Maeda, Sumihiro Masui, Tohru Okano, Hideyuki Dewender, Johannes Seltmann, Stefanie Kurtz, Andreas Masuya, Hiroshi Nakamura, Yukio Sheldon, Michael Schneider, Juliane Stacey, Glyn N. Panina, Yulia Fujibuchi, Wataru Stem Cell Reports Resource The past decade has witnessed an extremely rapid increase in the number of newly established stem cell lines. However, due to the lack of a standardized format, data exchange among stem cell line resources has been challenging, and no system can search all stem cell lines across resources worldwide. To solve this problem, we have developed the Integrated Collection of Stem Cell Bank data (ICSCB) (http://icscb.stemcellinformatics.org/), the largest database search portal for stem cell line information, based on the standardized data items and terms of the MIACARM framework. Currently, ICSCB can retrieve >16,000 cell lines from four major data resources in Europe, Japan, and the United States. ICSCB is automatically updated to provide the latest cell line information, and its integrative search helps users collect cell line information for over 1,000 diseases, including many rare diseases worldwide, which has been a formidable task, thereby distinguishing itself from other database search portals. Elsevier 2021-03-18 /pmc/articles/PMC8072026/ /pubmed/33740463 http://dx.doi.org/10.1016/j.stemcr.2021.02.014 Text en © 2021 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Resource Chen, Ying Sakurai, Kunie Maeda, Sumihiro Masui, Tohru Okano, Hideyuki Dewender, Johannes Seltmann, Stefanie Kurtz, Andreas Masuya, Hiroshi Nakamura, Yukio Sheldon, Michael Schneider, Juliane Stacey, Glyn N. Panina, Yulia Fujibuchi, Wataru Integrated Collection of Stem Cell Bank Data, a Data Portal for Standardized Stem Cell Information |
title | Integrated Collection of Stem Cell Bank Data, a Data Portal for Standardized Stem Cell Information |
title_full | Integrated Collection of Stem Cell Bank Data, a Data Portal for Standardized Stem Cell Information |
title_fullStr | Integrated Collection of Stem Cell Bank Data, a Data Portal for Standardized Stem Cell Information |
title_full_unstemmed | Integrated Collection of Stem Cell Bank Data, a Data Portal for Standardized Stem Cell Information |
title_short | Integrated Collection of Stem Cell Bank Data, a Data Portal for Standardized Stem Cell Information |
title_sort | integrated collection of stem cell bank data, a data portal for standardized stem cell information |
topic | Resource |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8072026/ https://www.ncbi.nlm.nih.gov/pubmed/33740463 http://dx.doi.org/10.1016/j.stemcr.2021.02.014 |
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