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Identification of Genetic Variants in 65 Obesity Related Genes in a Cohort of Portuguese Obese Individuals

Obesity is a major public health problem, which has a strong genetic component that interplays with environmental factors. Several genes are known to be implicated in the regulation of body weight. The identification of alleles that can be associated with obesity is a key element to control this pan...

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Autores principales: Ginete, Catarina, Serrasqueiro, Bernardo, Silva-Nunes, José, Veiga, Luísa, Brito, Miguel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8073382/
https://www.ncbi.nlm.nih.gov/pubmed/33921825
http://dx.doi.org/10.3390/genes12040603
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author Ginete, Catarina
Serrasqueiro, Bernardo
Silva-Nunes, José
Veiga, Luísa
Brito, Miguel
author_facet Ginete, Catarina
Serrasqueiro, Bernardo
Silva-Nunes, José
Veiga, Luísa
Brito, Miguel
author_sort Ginete, Catarina
collection PubMed
description Obesity is a major public health problem, which has a strong genetic component that interplays with environmental factors. Several genes are known to be implicated in the regulation of body weight. The identification of alleles that can be associated with obesity is a key element to control this pandemic. On the basis of a Portuguese population, 65 obesity-related genes are sequenced using Next-Generation Sequencing (NGS) in 72 individuals with obesity, in order to identify variants associated with monogenic obesity and potential risk factors. A total of 429 variants are identified, 129 of which had already been associated with the phenotype. Comparing our results with the European and Global frequencies, from 1000 Genomes project, 23 potential risk variants are identified. Six new variants are discovered in heterozygous carriers: four missense (genes ALMS1-NM_015120.4:c.5552C>T; SORCS1-NM_001013031.2:c.1072A>G and NM_001013031.2: c.2491A>C; TMEM67-NM_153704.5:c.158A>G) and two synonymous (genes BBS1-NM_024649.4:c.1437C>T; TMEM67-NM_153704.5:c.2583T>C). Functional studies should be performed to validate these new findings and evaluate their penetrance and pathogenicity. Regardless of no cases of monogenic obesity being identified, this kind of investigational study is important when we are still trying to understand the aetiology and pathophysiology of obesity. This will allow the identification of rare variants associated with obesity and the study of their prevalence in specific populational groups.
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spelling pubmed-80733822021-04-27 Identification of Genetic Variants in 65 Obesity Related Genes in a Cohort of Portuguese Obese Individuals Ginete, Catarina Serrasqueiro, Bernardo Silva-Nunes, José Veiga, Luísa Brito, Miguel Genes (Basel) Article Obesity is a major public health problem, which has a strong genetic component that interplays with environmental factors. Several genes are known to be implicated in the regulation of body weight. The identification of alleles that can be associated with obesity is a key element to control this pandemic. On the basis of a Portuguese population, 65 obesity-related genes are sequenced using Next-Generation Sequencing (NGS) in 72 individuals with obesity, in order to identify variants associated with monogenic obesity and potential risk factors. A total of 429 variants are identified, 129 of which had already been associated with the phenotype. Comparing our results with the European and Global frequencies, from 1000 Genomes project, 23 potential risk variants are identified. Six new variants are discovered in heterozygous carriers: four missense (genes ALMS1-NM_015120.4:c.5552C>T; SORCS1-NM_001013031.2:c.1072A>G and NM_001013031.2: c.2491A>C; TMEM67-NM_153704.5:c.158A>G) and two synonymous (genes BBS1-NM_024649.4:c.1437C>T; TMEM67-NM_153704.5:c.2583T>C). Functional studies should be performed to validate these new findings and evaluate their penetrance and pathogenicity. Regardless of no cases of monogenic obesity being identified, this kind of investigational study is important when we are still trying to understand the aetiology and pathophysiology of obesity. This will allow the identification of rare variants associated with obesity and the study of their prevalence in specific populational groups. MDPI 2021-04-19 /pmc/articles/PMC8073382/ /pubmed/33921825 http://dx.doi.org/10.3390/genes12040603 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ginete, Catarina
Serrasqueiro, Bernardo
Silva-Nunes, José
Veiga, Luísa
Brito, Miguel
Identification of Genetic Variants in 65 Obesity Related Genes in a Cohort of Portuguese Obese Individuals
title Identification of Genetic Variants in 65 Obesity Related Genes in a Cohort of Portuguese Obese Individuals
title_full Identification of Genetic Variants in 65 Obesity Related Genes in a Cohort of Portuguese Obese Individuals
title_fullStr Identification of Genetic Variants in 65 Obesity Related Genes in a Cohort of Portuguese Obese Individuals
title_full_unstemmed Identification of Genetic Variants in 65 Obesity Related Genes in a Cohort of Portuguese Obese Individuals
title_short Identification of Genetic Variants in 65 Obesity Related Genes in a Cohort of Portuguese Obese Individuals
title_sort identification of genetic variants in 65 obesity related genes in a cohort of portuguese obese individuals
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8073382/
https://www.ncbi.nlm.nih.gov/pubmed/33921825
http://dx.doi.org/10.3390/genes12040603
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