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Prognostic Assessment in High-Grade Soft-Tissue Sarcoma Patients: A Comparison of Semantic Image Analysis and Radiomics

SIMPLE SUMMARY: Soft-tissue sarcomas constitute a rare cancer type, with approximately 40% of patients experiencing disease recurrence. There is a need for a better identification of patients with especially aggressive tumors. Previous research demonstrated that the qualitative assessment of imaging...

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Autores principales: Peeken, Jan C., Neumann, Jan, Asadpour, Rebecca, Leonhardt, Yannik, Moreira, Joao R., Hippe, Daniel S., Klymenko, Olena, Foreman, Sarah C., von Schacky, Claudio E., Spraker, Matthew B., Schaub, Stephanie K., Dapper, Hendrik, Knebel, Carolin, Mayr, Nina A., Woodruff, Henry C., Lambin, Philippe, Nyflot, Matthew J., Gersing, Alexandra S., Combs, Stephanie E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8073388/
https://www.ncbi.nlm.nih.gov/pubmed/33923697
http://dx.doi.org/10.3390/cancers13081929
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author Peeken, Jan C.
Neumann, Jan
Asadpour, Rebecca
Leonhardt, Yannik
Moreira, Joao R.
Hippe, Daniel S.
Klymenko, Olena
Foreman, Sarah C.
von Schacky, Claudio E.
Spraker, Matthew B.
Schaub, Stephanie K.
Dapper, Hendrik
Knebel, Carolin
Mayr, Nina A.
Woodruff, Henry C.
Lambin, Philippe
Nyflot, Matthew J.
Gersing, Alexandra S.
Combs, Stephanie E.
author_facet Peeken, Jan C.
Neumann, Jan
Asadpour, Rebecca
Leonhardt, Yannik
Moreira, Joao R.
Hippe, Daniel S.
Klymenko, Olena
Foreman, Sarah C.
von Schacky, Claudio E.
Spraker, Matthew B.
Schaub, Stephanie K.
Dapper, Hendrik
Knebel, Carolin
Mayr, Nina A.
Woodruff, Henry C.
Lambin, Philippe
Nyflot, Matthew J.
Gersing, Alexandra S.
Combs, Stephanie E.
author_sort Peeken, Jan C.
collection PubMed
description SIMPLE SUMMARY: Soft-tissue sarcomas constitute a rare cancer type, with approximately 40% of patients experiencing disease recurrence. There is a need for a better identification of patients with especially aggressive tumors. Previous research demonstrated that the qualitative assessment of imaging data by radiologists (“semantic features”) and the algorithm-based analysis of imaging data (termed “radiomics”) may help to achieve a more thorough identification of patients at high risk for cancer-specific mortality. In this work, we compared the performance of predictions of patients’ survival based on semantic features extracted by radiologists with a “radiomic” approach. While some semantic features were helpful to identify high-risk patients, the radiomic approach achieved an overall improved ability to identify patients at high risk. For the radiomic prediction, only one MRI sequence was sufficient and an MRI sequence without the need for contrast agent achieved good predictive performance. ABSTRACT: Background: In patients with soft-tissue sarcomas of the extremities, the treatment decision is currently regularly based on tumor grading and size. The imaging-based analysis may pose an alternative way to stratify patients’ risk. In this work, we compared the value of MRI-based radiomics with expert-derived semantic imaging features for the prediction of overall survival (OS). Methods: Fat-saturated T2-weighted sequences (T2FS) and contrast-enhanced T1-weighted fat-saturated (T1FSGd) sequences were collected from two independent retrospective cohorts (training: 108 patients; testing: 71 patients). After preprocessing, 105 radiomic features were extracted. Semantic imaging features were determined by three independent radiologists. Three machine learning techniques (elastic net regression (ENR), least absolute shrinkage and selection operator, and random survival forest) were compared to predict OS. Results: ENR models achieved the best predictive performance. Histologies and clinical staging differed significantly between both cohorts. The semantic prognostic model achieved a predictive performance with a C-index of 0.58 within the test set. This was worse compared to a clinical staging system (C-index: 0.61) and the radiomic models (C-indices: T1FSGd: 0.64, T2FS: 0.63). Both radiomic models achieved significant patient stratification. Conclusions: T2FS and T1FSGd-based radiomic models outperformed semantic imaging features for prognostic assessment.
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spelling pubmed-80733882021-04-27 Prognostic Assessment in High-Grade Soft-Tissue Sarcoma Patients: A Comparison of Semantic Image Analysis and Radiomics Peeken, Jan C. Neumann, Jan Asadpour, Rebecca Leonhardt, Yannik Moreira, Joao R. Hippe, Daniel S. Klymenko, Olena Foreman, Sarah C. von Schacky, Claudio E. Spraker, Matthew B. Schaub, Stephanie K. Dapper, Hendrik Knebel, Carolin Mayr, Nina A. Woodruff, Henry C. Lambin, Philippe Nyflot, Matthew J. Gersing, Alexandra S. Combs, Stephanie E. Cancers (Basel) Article SIMPLE SUMMARY: Soft-tissue sarcomas constitute a rare cancer type, with approximately 40% of patients experiencing disease recurrence. There is a need for a better identification of patients with especially aggressive tumors. Previous research demonstrated that the qualitative assessment of imaging data by radiologists (“semantic features”) and the algorithm-based analysis of imaging data (termed “radiomics”) may help to achieve a more thorough identification of patients at high risk for cancer-specific mortality. In this work, we compared the performance of predictions of patients’ survival based on semantic features extracted by radiologists with a “radiomic” approach. While some semantic features were helpful to identify high-risk patients, the radiomic approach achieved an overall improved ability to identify patients at high risk. For the radiomic prediction, only one MRI sequence was sufficient and an MRI sequence without the need for contrast agent achieved good predictive performance. ABSTRACT: Background: In patients with soft-tissue sarcomas of the extremities, the treatment decision is currently regularly based on tumor grading and size. The imaging-based analysis may pose an alternative way to stratify patients’ risk. In this work, we compared the value of MRI-based radiomics with expert-derived semantic imaging features for the prediction of overall survival (OS). Methods: Fat-saturated T2-weighted sequences (T2FS) and contrast-enhanced T1-weighted fat-saturated (T1FSGd) sequences were collected from two independent retrospective cohorts (training: 108 patients; testing: 71 patients). After preprocessing, 105 radiomic features were extracted. Semantic imaging features were determined by three independent radiologists. Three machine learning techniques (elastic net regression (ENR), least absolute shrinkage and selection operator, and random survival forest) were compared to predict OS. Results: ENR models achieved the best predictive performance. Histologies and clinical staging differed significantly between both cohorts. The semantic prognostic model achieved a predictive performance with a C-index of 0.58 within the test set. This was worse compared to a clinical staging system (C-index: 0.61) and the radiomic models (C-indices: T1FSGd: 0.64, T2FS: 0.63). Both radiomic models achieved significant patient stratification. Conclusions: T2FS and T1FSGd-based radiomic models outperformed semantic imaging features for prognostic assessment. MDPI 2021-04-16 /pmc/articles/PMC8073388/ /pubmed/33923697 http://dx.doi.org/10.3390/cancers13081929 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Peeken, Jan C.
Neumann, Jan
Asadpour, Rebecca
Leonhardt, Yannik
Moreira, Joao R.
Hippe, Daniel S.
Klymenko, Olena
Foreman, Sarah C.
von Schacky, Claudio E.
Spraker, Matthew B.
Schaub, Stephanie K.
Dapper, Hendrik
Knebel, Carolin
Mayr, Nina A.
Woodruff, Henry C.
Lambin, Philippe
Nyflot, Matthew J.
Gersing, Alexandra S.
Combs, Stephanie E.
Prognostic Assessment in High-Grade Soft-Tissue Sarcoma Patients: A Comparison of Semantic Image Analysis and Radiomics
title Prognostic Assessment in High-Grade Soft-Tissue Sarcoma Patients: A Comparison of Semantic Image Analysis and Radiomics
title_full Prognostic Assessment in High-Grade Soft-Tissue Sarcoma Patients: A Comparison of Semantic Image Analysis and Radiomics
title_fullStr Prognostic Assessment in High-Grade Soft-Tissue Sarcoma Patients: A Comparison of Semantic Image Analysis and Radiomics
title_full_unstemmed Prognostic Assessment in High-Grade Soft-Tissue Sarcoma Patients: A Comparison of Semantic Image Analysis and Radiomics
title_short Prognostic Assessment in High-Grade Soft-Tissue Sarcoma Patients: A Comparison of Semantic Image Analysis and Radiomics
title_sort prognostic assessment in high-grade soft-tissue sarcoma patients: a comparison of semantic image analysis and radiomics
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8073388/
https://www.ncbi.nlm.nih.gov/pubmed/33923697
http://dx.doi.org/10.3390/cancers13081929
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