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Unique Variant Spectrum in a Jordanian Cohort with Inherited Retinal Dystrophies
Whole Exome Sequencing (WES) is a powerful approach for detecting sequence variations in the human genome. The aim of this study was to investigate the genetic defects in Jordanian patients with inherited retinal dystrophies (IRDs) using WES. WES was performed on proband patients’ DNA samples from 5...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8074154/ https://www.ncbi.nlm.nih.gov/pubmed/33921607 http://dx.doi.org/10.3390/genes12040593 |
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author | Azab, Bilal Dardas, Zain Aburizeg, Dunia Al-Bdour, Muawyah Abu-Ameerh, Mohammed Saleh, Tareq Barham, Raghda Maswadi, Ranad Ababneh, Nidaa A Alsalem, Mohammad Zouk, Hana Amr, Sami Awidi, Abdalla |
author_facet | Azab, Bilal Dardas, Zain Aburizeg, Dunia Al-Bdour, Muawyah Abu-Ameerh, Mohammed Saleh, Tareq Barham, Raghda Maswadi, Ranad Ababneh, Nidaa A Alsalem, Mohammad Zouk, Hana Amr, Sami Awidi, Abdalla |
author_sort | Azab, Bilal |
collection | PubMed |
description | Whole Exome Sequencing (WES) is a powerful approach for detecting sequence variations in the human genome. The aim of this study was to investigate the genetic defects in Jordanian patients with inherited retinal dystrophies (IRDs) using WES. WES was performed on proband patients’ DNA samples from 55 Jordanian families. Sanger sequencing was used for validation and segregation analysis of the detected, potential disease-causing variants (DCVs). Thirty-five putatively causative variants (6 novel and 29 known) in 21 IRD-associated genes were identified in 71% of probands (39 of the 55 families). Three families showed phenotypes different from the typically reported clinical findings associated with the causative genes. To our knowledge, this is the largest genetic analysis of IRDs in the Jordanian population to date. Our study also confirms that WES is a powerful tool for the molecular diagnosis of IRDs in large patient cohorts. |
format | Online Article Text |
id | pubmed-8074154 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-80741542021-04-27 Unique Variant Spectrum in a Jordanian Cohort with Inherited Retinal Dystrophies Azab, Bilal Dardas, Zain Aburizeg, Dunia Al-Bdour, Muawyah Abu-Ameerh, Mohammed Saleh, Tareq Barham, Raghda Maswadi, Ranad Ababneh, Nidaa A Alsalem, Mohammad Zouk, Hana Amr, Sami Awidi, Abdalla Genes (Basel) Article Whole Exome Sequencing (WES) is a powerful approach for detecting sequence variations in the human genome. The aim of this study was to investigate the genetic defects in Jordanian patients with inherited retinal dystrophies (IRDs) using WES. WES was performed on proband patients’ DNA samples from 55 Jordanian families. Sanger sequencing was used for validation and segregation analysis of the detected, potential disease-causing variants (DCVs). Thirty-five putatively causative variants (6 novel and 29 known) in 21 IRD-associated genes were identified in 71% of probands (39 of the 55 families). Three families showed phenotypes different from the typically reported clinical findings associated with the causative genes. To our knowledge, this is the largest genetic analysis of IRDs in the Jordanian population to date. Our study also confirms that WES is a powerful tool for the molecular diagnosis of IRDs in large patient cohorts. MDPI 2021-04-19 /pmc/articles/PMC8074154/ /pubmed/33921607 http://dx.doi.org/10.3390/genes12040593 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Azab, Bilal Dardas, Zain Aburizeg, Dunia Al-Bdour, Muawyah Abu-Ameerh, Mohammed Saleh, Tareq Barham, Raghda Maswadi, Ranad Ababneh, Nidaa A Alsalem, Mohammad Zouk, Hana Amr, Sami Awidi, Abdalla Unique Variant Spectrum in a Jordanian Cohort with Inherited Retinal Dystrophies |
title | Unique Variant Spectrum in a Jordanian Cohort with Inherited Retinal Dystrophies |
title_full | Unique Variant Spectrum in a Jordanian Cohort with Inherited Retinal Dystrophies |
title_fullStr | Unique Variant Spectrum in a Jordanian Cohort with Inherited Retinal Dystrophies |
title_full_unstemmed | Unique Variant Spectrum in a Jordanian Cohort with Inherited Retinal Dystrophies |
title_short | Unique Variant Spectrum in a Jordanian Cohort with Inherited Retinal Dystrophies |
title_sort | unique variant spectrum in a jordanian cohort with inherited retinal dystrophies |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8074154/ https://www.ncbi.nlm.nih.gov/pubmed/33921607 http://dx.doi.org/10.3390/genes12040593 |
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