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Understanding the Variability in Graph Data Sets through Statistical Modeling on the Stiefel Manifold

Network analysis provides a rich framework to model complex phenomena, such as human brain connectivity. It has proven efficient to understand their natural properties and design predictive models. In this paper, we study the variability within groups of networks, i.e., the structure of connection s...

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Autores principales: Mantoux, Clément, Couvy-Duchesne, Baptiste, Cacciamani, Federica, Epelbaum, Stéphane, Durrleman, Stanley, Allassonnière, Stéphanie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8074266/
https://www.ncbi.nlm.nih.gov/pubmed/33924060
http://dx.doi.org/10.3390/e23040490
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author Mantoux, Clément
Couvy-Duchesne, Baptiste
Cacciamani, Federica
Epelbaum, Stéphane
Durrleman, Stanley
Allassonnière, Stéphanie
author_facet Mantoux, Clément
Couvy-Duchesne, Baptiste
Cacciamani, Federica
Epelbaum, Stéphane
Durrleman, Stanley
Allassonnière, Stéphanie
author_sort Mantoux, Clément
collection PubMed
description Network analysis provides a rich framework to model complex phenomena, such as human brain connectivity. It has proven efficient to understand their natural properties and design predictive models. In this paper, we study the variability within groups of networks, i.e., the structure of connection similarities and differences across a set of networks. We propose a statistical framework to model these variations based on manifold-valued latent factors. Each network adjacency matrix is decomposed as a weighted sum of matrix patterns with rank one. Each pattern is described as a random perturbation of a dictionary element. As a hierarchical statistical model, it enables the analysis of heterogeneous populations of adjacency matrices using mixtures. Our framework can also be used to infer the weight of missing edges. We estimate the parameters of the model using an Expectation-Maximization-based algorithm. Experimenting on synthetic data, we show that the algorithm is able to accurately estimate the latent structure in both low and high dimensions. We apply our model on a large data set of functional brain connectivity matrices from the UK Biobank. Our results suggest that the proposed model accurately describes the complex variability in the data set with a small number of degrees of freedom.
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spelling pubmed-80742662021-04-27 Understanding the Variability in Graph Data Sets through Statistical Modeling on the Stiefel Manifold Mantoux, Clément Couvy-Duchesne, Baptiste Cacciamani, Federica Epelbaum, Stéphane Durrleman, Stanley Allassonnière, Stéphanie Entropy (Basel) Article Network analysis provides a rich framework to model complex phenomena, such as human brain connectivity. It has proven efficient to understand their natural properties and design predictive models. In this paper, we study the variability within groups of networks, i.e., the structure of connection similarities and differences across a set of networks. We propose a statistical framework to model these variations based on manifold-valued latent factors. Each network adjacency matrix is decomposed as a weighted sum of matrix patterns with rank one. Each pattern is described as a random perturbation of a dictionary element. As a hierarchical statistical model, it enables the analysis of heterogeneous populations of adjacency matrices using mixtures. Our framework can also be used to infer the weight of missing edges. We estimate the parameters of the model using an Expectation-Maximization-based algorithm. Experimenting on synthetic data, we show that the algorithm is able to accurately estimate the latent structure in both low and high dimensions. We apply our model on a large data set of functional brain connectivity matrices from the UK Biobank. Our results suggest that the proposed model accurately describes the complex variability in the data set with a small number of degrees of freedom. MDPI 2021-04-20 /pmc/articles/PMC8074266/ /pubmed/33924060 http://dx.doi.org/10.3390/e23040490 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Mantoux, Clément
Couvy-Duchesne, Baptiste
Cacciamani, Federica
Epelbaum, Stéphane
Durrleman, Stanley
Allassonnière, Stéphanie
Understanding the Variability in Graph Data Sets through Statistical Modeling on the Stiefel Manifold
title Understanding the Variability in Graph Data Sets through Statistical Modeling on the Stiefel Manifold
title_full Understanding the Variability in Graph Data Sets through Statistical Modeling on the Stiefel Manifold
title_fullStr Understanding the Variability in Graph Data Sets through Statistical Modeling on the Stiefel Manifold
title_full_unstemmed Understanding the Variability in Graph Data Sets through Statistical Modeling on the Stiefel Manifold
title_short Understanding the Variability in Graph Data Sets through Statistical Modeling on the Stiefel Manifold
title_sort understanding the variability in graph data sets through statistical modeling on the stiefel manifold
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8074266/
https://www.ncbi.nlm.nih.gov/pubmed/33924060
http://dx.doi.org/10.3390/e23040490
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