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Tremor assessment using smartphone sensor data and fuzzy reasoning
BACKGROUND: Tremor severity assessment is an important step for the diagnosis and treatment decision-making of essential tremor (ET) patients. Traditionally, tremor severity is assessed by using questionnaires (e.g., ETRS and QUEST surveys). In this work we assume the possibility of assessing tremor...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8074469/ https://www.ncbi.nlm.nih.gov/pubmed/33902458 http://dx.doi.org/10.1186/s12859-021-03961-8 |
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author | Fuchs, Caro Nobile, Marco S. Zamora, Guillaume Degeneffe, Aurélie Kubben, Pieter Kaymak, Uzay |
author_facet | Fuchs, Caro Nobile, Marco S. Zamora, Guillaume Degeneffe, Aurélie Kubben, Pieter Kaymak, Uzay |
author_sort | Fuchs, Caro |
collection | PubMed |
description | BACKGROUND: Tremor severity assessment is an important step for the diagnosis and treatment decision-making of essential tremor (ET) patients. Traditionally, tremor severity is assessed by using questionnaires (e.g., ETRS and QUEST surveys). In this work we assume the possibility of assessing tremor severity using sensor data and computerized analyses. The goal of this work is to assess severity of tremor objectively, to be better able to asses improvement in ET patients due to deep brain stimulation or other treatments. METHODS: We collect tremor data by strapping smartphones to the wrists of ET patients. The resulting raw sensor data is then pre-processed to remove any artifact due to patient’s intentional movement. Finally, this data is exploited to automatically build a transparent, interpretable, and succinct fuzzy model for the severity assessment of ET. For this purpose, we exploit pyFUME, a tool for the data-driven estimation of fuzzy models. It leverages the FST-PSO swarm intelligence meta-heuristic to identify optimal clusters in data, reducing the possibility of a premature convergence in local minima which would result in a sub-optimal model. pyFUME was also combined with GRABS, a novel methodology for the automatic simplification of fuzzy rules. RESULTS: Our model is able to assess tremor severity of patients suffering from Essential Tremor, notably without the need for subjective questionnaires nor interviews. The fuzzy model improves the mean absolute error (MAE) metric by 78–81% compared to linear models and by 71–74% compared to a model based on decision trees. CONCLUSION: This study confirms that tremor data gathered using the smartphones is useful for the constructing of machine learning models that can be used to support the diagnosis and monitoring of patients who suffer from Essential Tremor. The model produced by our methodology is easy to inspect and, notably, characterized by a lower error with respect to approaches based on linear models or decision trees. |
format | Online Article Text |
id | pubmed-8074469 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-80744692021-04-26 Tremor assessment using smartphone sensor data and fuzzy reasoning Fuchs, Caro Nobile, Marco S. Zamora, Guillaume Degeneffe, Aurélie Kubben, Pieter Kaymak, Uzay BMC Bioinformatics Research BACKGROUND: Tremor severity assessment is an important step for the diagnosis and treatment decision-making of essential tremor (ET) patients. Traditionally, tremor severity is assessed by using questionnaires (e.g., ETRS and QUEST surveys). In this work we assume the possibility of assessing tremor severity using sensor data and computerized analyses. The goal of this work is to assess severity of tremor objectively, to be better able to asses improvement in ET patients due to deep brain stimulation or other treatments. METHODS: We collect tremor data by strapping smartphones to the wrists of ET patients. The resulting raw sensor data is then pre-processed to remove any artifact due to patient’s intentional movement. Finally, this data is exploited to automatically build a transparent, interpretable, and succinct fuzzy model for the severity assessment of ET. For this purpose, we exploit pyFUME, a tool for the data-driven estimation of fuzzy models. It leverages the FST-PSO swarm intelligence meta-heuristic to identify optimal clusters in data, reducing the possibility of a premature convergence in local minima which would result in a sub-optimal model. pyFUME was also combined with GRABS, a novel methodology for the automatic simplification of fuzzy rules. RESULTS: Our model is able to assess tremor severity of patients suffering from Essential Tremor, notably without the need for subjective questionnaires nor interviews. The fuzzy model improves the mean absolute error (MAE) metric by 78–81% compared to linear models and by 71–74% compared to a model based on decision trees. CONCLUSION: This study confirms that tremor data gathered using the smartphones is useful for the constructing of machine learning models that can be used to support the diagnosis and monitoring of patients who suffer from Essential Tremor. The model produced by our methodology is easy to inspect and, notably, characterized by a lower error with respect to approaches based on linear models or decision trees. BioMed Central 2021-04-26 /pmc/articles/PMC8074469/ /pubmed/33902458 http://dx.doi.org/10.1186/s12859-021-03961-8 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Fuchs, Caro Nobile, Marco S. Zamora, Guillaume Degeneffe, Aurélie Kubben, Pieter Kaymak, Uzay Tremor assessment using smartphone sensor data and fuzzy reasoning |
title | Tremor assessment using smartphone sensor data and fuzzy reasoning |
title_full | Tremor assessment using smartphone sensor data and fuzzy reasoning |
title_fullStr | Tremor assessment using smartphone sensor data and fuzzy reasoning |
title_full_unstemmed | Tremor assessment using smartphone sensor data and fuzzy reasoning |
title_short | Tremor assessment using smartphone sensor data and fuzzy reasoning |
title_sort | tremor assessment using smartphone sensor data and fuzzy reasoning |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8074469/ https://www.ncbi.nlm.nih.gov/pubmed/33902458 http://dx.doi.org/10.1186/s12859-021-03961-8 |
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