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The significance of long-range correction to the hydroperoxyl radical-scavenging reaction of trans-resveratrol and gnetin C
Density functional theory has been gaining popularity for studying the radical scavenging activity of antioxidants. However, only a few studies investigate the importance of calculation methods on the radical-scavenging reactions. In this study, we examined the significance of (i) the long-range cor...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8074789/ https://www.ncbi.nlm.nih.gov/pubmed/33972845 http://dx.doi.org/10.1098/rsos.201127 |
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author | Khoirunisa, Vera Rusydi, Febdian Boli, Lusia S. P. Puspitasari, Ira Rachmawati, Heni Dipojono, Hermawan K. |
author_facet | Khoirunisa, Vera Rusydi, Febdian Boli, Lusia S. P. Puspitasari, Ira Rachmawati, Heni Dipojono, Hermawan K. |
author_sort | Khoirunisa, Vera |
collection | PubMed |
description | Density functional theory has been gaining popularity for studying the radical scavenging activity of antioxidants. However, only a few studies investigate the importance of calculation methods on the radical-scavenging reactions. In this study, we examined the significance of (i) the long-range correction on the coulombic interaction and (ii) the London dispersion correction to the hydroperoxyl radical-scavenging reaction of trans-resveratrol and gnetin C. We employed B3LYP, CAM-B3LYP, M06-2X exchange-correlation functionals and B3LYP with the D3 version of Grimme’s dispersion in the calculations. The results showed that long-range correction on the coulombic interaction had a significant effect on the increase of reaction and activation energies. The increase was in line with the change of hydroperoxyl radical’s orientation in the transition state structure. Meanwhile, the London dispersion correction only had a minor effect on the transition state structure, reaction energy and activation energy. Overall, long-range correction on the coulombic interaction had a significant impact on the radical-scavenging reaction. |
format | Online Article Text |
id | pubmed-8074789 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-80747892021-05-09 The significance of long-range correction to the hydroperoxyl radical-scavenging reaction of trans-resveratrol and gnetin C Khoirunisa, Vera Rusydi, Febdian Boli, Lusia S. P. Puspitasari, Ira Rachmawati, Heni Dipojono, Hermawan K. R Soc Open Sci Chemistry Density functional theory has been gaining popularity for studying the radical scavenging activity of antioxidants. However, only a few studies investigate the importance of calculation methods on the radical-scavenging reactions. In this study, we examined the significance of (i) the long-range correction on the coulombic interaction and (ii) the London dispersion correction to the hydroperoxyl radical-scavenging reaction of trans-resveratrol and gnetin C. We employed B3LYP, CAM-B3LYP, M06-2X exchange-correlation functionals and B3LYP with the D3 version of Grimme’s dispersion in the calculations. The results showed that long-range correction on the coulombic interaction had a significant effect on the increase of reaction and activation energies. The increase was in line with the change of hydroperoxyl radical’s orientation in the transition state structure. Meanwhile, the London dispersion correction only had a minor effect on the transition state structure, reaction energy and activation energy. Overall, long-range correction on the coulombic interaction had a significant impact on the radical-scavenging reaction. The Royal Society 2021-02-10 /pmc/articles/PMC8074789/ /pubmed/33972845 http://dx.doi.org/10.1098/rsos.201127 Text en © 2021 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Chemistry Khoirunisa, Vera Rusydi, Febdian Boli, Lusia S. P. Puspitasari, Ira Rachmawati, Heni Dipojono, Hermawan K. The significance of long-range correction to the hydroperoxyl radical-scavenging reaction of trans-resveratrol and gnetin C |
title | The significance of long-range correction to the hydroperoxyl radical-scavenging reaction of trans-resveratrol and gnetin C |
title_full | The significance of long-range correction to the hydroperoxyl radical-scavenging reaction of trans-resveratrol and gnetin C |
title_fullStr | The significance of long-range correction to the hydroperoxyl radical-scavenging reaction of trans-resveratrol and gnetin C |
title_full_unstemmed | The significance of long-range correction to the hydroperoxyl radical-scavenging reaction of trans-resveratrol and gnetin C |
title_short | The significance of long-range correction to the hydroperoxyl radical-scavenging reaction of trans-resveratrol and gnetin C |
title_sort | significance of long-range correction to the hydroperoxyl radical-scavenging reaction of trans-resveratrol and gnetin c |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8074789/ https://www.ncbi.nlm.nih.gov/pubmed/33972845 http://dx.doi.org/10.1098/rsos.201127 |
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