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Characterization of the mitochondrial genome of Tinda javana (Macquart, 1838) (Diptera: Stratiomyidae: Pachygastrinae)
We have assembled and annotated the mitochondrial genome of Tinda javana (Macquart, 1838) (a species of soldier fly) in this study. It is 15,495 bp in length, including 13 protein-coding genes (PCGs), two ribosomal RNA genes (rRNAs), 22 transfer RNA genes (tRNAs), and a large non-coding control regi...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8078917/ https://www.ncbi.nlm.nih.gov/pubmed/33969185 http://dx.doi.org/10.1080/23802359.2021.1910081 |
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author | Hu, Kai Yang, Zaihua |
author_facet | Hu, Kai Yang, Zaihua |
author_sort | Hu, Kai |
collection | PubMed |
description | We have assembled and annotated the mitochondrial genome of Tinda javana (Macquart, 1838) (a species of soldier fly) in this study. It is 15,495 bp in length, including 13 protein-coding genes (PCGs), two ribosomal RNA genes (rRNAs), 22 transfer RNA genes (tRNAs), and a large non-coding control region (length: 704 bp). The nucleotide composition of whole mitochondrial genome biases toward A and T (75.5%). Most PCGs use ATN as initiation codon, except for cox1 which starts with CGA. All PCGs end with common termination codon TAA/G. Phylogenetic analyses based on the nucleotide sequence data supported the monophyly of Stratiomyidae and the sister relationship between Pachygastrinae and the clade (Nemotelinae + (Hermetiinae + Sarginae)). |
format | Online Article Text |
id | pubmed-8078917 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-80789172021-05-06 Characterization of the mitochondrial genome of Tinda javana (Macquart, 1838) (Diptera: Stratiomyidae: Pachygastrinae) Hu, Kai Yang, Zaihua Mitochondrial DNA B Resour Mitogenome Announcement We have assembled and annotated the mitochondrial genome of Tinda javana (Macquart, 1838) (a species of soldier fly) in this study. It is 15,495 bp in length, including 13 protein-coding genes (PCGs), two ribosomal RNA genes (rRNAs), 22 transfer RNA genes (tRNAs), and a large non-coding control region (length: 704 bp). The nucleotide composition of whole mitochondrial genome biases toward A and T (75.5%). Most PCGs use ATN as initiation codon, except for cox1 which starts with CGA. All PCGs end with common termination codon TAA/G. Phylogenetic analyses based on the nucleotide sequence data supported the monophyly of Stratiomyidae and the sister relationship between Pachygastrinae and the clade (Nemotelinae + (Hermetiinae + Sarginae)). Taylor & Francis 2021-04-15 /pmc/articles/PMC8078917/ /pubmed/33969185 http://dx.doi.org/10.1080/23802359.2021.1910081 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Hu, Kai Yang, Zaihua Characterization of the mitochondrial genome of Tinda javana (Macquart, 1838) (Diptera: Stratiomyidae: Pachygastrinae) |
title | Characterization of the mitochondrial genome of Tinda javana (Macquart, 1838) (Diptera: Stratiomyidae: Pachygastrinae) |
title_full | Characterization of the mitochondrial genome of Tinda javana (Macquart, 1838) (Diptera: Stratiomyidae: Pachygastrinae) |
title_fullStr | Characterization of the mitochondrial genome of Tinda javana (Macquart, 1838) (Diptera: Stratiomyidae: Pachygastrinae) |
title_full_unstemmed | Characterization of the mitochondrial genome of Tinda javana (Macquart, 1838) (Diptera: Stratiomyidae: Pachygastrinae) |
title_short | Characterization of the mitochondrial genome of Tinda javana (Macquart, 1838) (Diptera: Stratiomyidae: Pachygastrinae) |
title_sort | characterization of the mitochondrial genome of tinda javana (macquart, 1838) (diptera: stratiomyidae: pachygastrinae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8078917/ https://www.ncbi.nlm.nih.gov/pubmed/33969185 http://dx.doi.org/10.1080/23802359.2021.1910081 |
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