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The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast China
The complete chloroplast genome of Pollia japonica, a medicinal herb native to East Asia was characterized. The size of the chloroplast genome is 165,076 bp in length with a large single copy (LSC) of 90,722 bp, a small single copy (SSC) of 19,146 bp, and a pair of inverted repeats of 27,604 bp. The...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8078960/ https://www.ncbi.nlm.nih.gov/pubmed/33969202 http://dx.doi.org/10.1080/23802359.2021.1911717 |
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author | Gu, Ye Ma, Qing |
author_facet | Gu, Ye Ma, Qing |
author_sort | Gu, Ye |
collection | PubMed |
description | The complete chloroplast genome of Pollia japonica, a medicinal herb native to East Asia was characterized. The size of the chloroplast genome is 165,076 bp in length with a large single copy (LSC) of 90,722 bp, a small single copy (SSC) of 19,146 bp, and a pair of inverted repeats of 27,604 bp. The chloroplast genome encodes a set of 131 genes, including 85 protein-coding, 38 tRNAs, and 8 rRNAs. Phylogenetic analysis based on complete chloroplast genomes validated the phylogenetic position of P. japonica and showed that the six species from Commelinales were fully resolved in a monophyletic clade sister to the Zingiberales. Species from the Zingiberales and Commelinales formed a molophyletic group sister to the Poales. The chloroplast genome of P. japonica provides an important resource for further study of molecular evolution in the Commelinaceae. |
format | Online Article Text |
id | pubmed-8078960 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-80789602021-05-06 The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast China Gu, Ye Ma, Qing Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome of Pollia japonica, a medicinal herb native to East Asia was characterized. The size of the chloroplast genome is 165,076 bp in length with a large single copy (LSC) of 90,722 bp, a small single copy (SSC) of 19,146 bp, and a pair of inverted repeats of 27,604 bp. The chloroplast genome encodes a set of 131 genes, including 85 protein-coding, 38 tRNAs, and 8 rRNAs. Phylogenetic analysis based on complete chloroplast genomes validated the phylogenetic position of P. japonica and showed that the six species from Commelinales were fully resolved in a monophyletic clade sister to the Zingiberales. Species from the Zingiberales and Commelinales formed a molophyletic group sister to the Poales. The chloroplast genome of P. japonica provides an important resource for further study of molecular evolution in the Commelinaceae. Taylor & Francis 2021-04-21 /pmc/articles/PMC8078960/ /pubmed/33969202 http://dx.doi.org/10.1080/23802359.2021.1911717 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Gu, Ye Ma, Qing The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast China |
title | The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast China |
title_full | The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast China |
title_fullStr | The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast China |
title_full_unstemmed | The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast China |
title_short | The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast China |
title_sort | complete chloroplast genome of pollia japonica (commelinaceae) from southeast china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8078960/ https://www.ncbi.nlm.nih.gov/pubmed/33969202 http://dx.doi.org/10.1080/23802359.2021.1911717 |
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