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Analysis of the relationship between geography and body color with the genetic diversity in the Echiura worm Urechis unicinctus based on the mitochondrial COI and D-loop sequences
Urechis unicinctus is the only Echiurini species distributed in Bohai Gulf of China. The wild populations of this species have sharply declined in China due to overfishing. Over 150 samples from Bohai Gulf were collected in the present study, which were classified into five populations according to...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8078999/ https://www.ncbi.nlm.nih.gov/pubmed/33969186 http://dx.doi.org/10.1080/23802359.2021.1910082 |
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author | Zhang, Saisai Li, Mo Sun, Yang Shang, Hongxin Wang, Lu Yang, Tingting Ma, Lin Chen, Ying Zhang, Bin Liu, Tong Chen, Wenbo |
author_facet | Zhang, Saisai Li, Mo Sun, Yang Shang, Hongxin Wang, Lu Yang, Tingting Ma, Lin Chen, Ying Zhang, Bin Liu, Tong Chen, Wenbo |
author_sort | Zhang, Saisai |
collection | PubMed |
description | Urechis unicinctus is the only Echiurini species distributed in Bohai Gulf of China. The wild populations of this species have sharply declined in China due to overfishing. Over 150 samples from Bohai Gulf were collected in the present study, which were classified into five populations according to their geographic areas and body colors. The genetic diversity and population structure of these populations were investigated by mitochondiral COI and D-loop sequences. The haplotype diversity of U. unicinctus based on COI and D-loop sequences were still high. In addition, the evolution rate of D-loop region could faster than the COI gene of U. unicinctus. Meanwhile, over 99% genetic diversity was contributed by different individuals within populations. Moreover, phylogenetic trees did not show clear geographic or color cluster. Our findings indicated that this species in Bohai Gulf of China should be treated as a whole population. |
format | Online Article Text |
id | pubmed-8078999 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-80789992021-05-06 Analysis of the relationship between geography and body color with the genetic diversity in the Echiura worm Urechis unicinctus based on the mitochondrial COI and D-loop sequences Zhang, Saisai Li, Mo Sun, Yang Shang, Hongxin Wang, Lu Yang, Tingting Ma, Lin Chen, Ying Zhang, Bin Liu, Tong Chen, Wenbo Mitochondrial DNA B Resour Rapid Communication Urechis unicinctus is the only Echiurini species distributed in Bohai Gulf of China. The wild populations of this species have sharply declined in China due to overfishing. Over 150 samples from Bohai Gulf were collected in the present study, which were classified into five populations according to their geographic areas and body colors. The genetic diversity and population structure of these populations were investigated by mitochondiral COI and D-loop sequences. The haplotype diversity of U. unicinctus based on COI and D-loop sequences were still high. In addition, the evolution rate of D-loop region could faster than the COI gene of U. unicinctus. Meanwhile, over 99% genetic diversity was contributed by different individuals within populations. Moreover, phylogenetic trees did not show clear geographic or color cluster. Our findings indicated that this species in Bohai Gulf of China should be treated as a whole population. Taylor & Francis 2021-04-15 /pmc/articles/PMC8078999/ /pubmed/33969186 http://dx.doi.org/10.1080/23802359.2021.1910082 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Rapid Communication Zhang, Saisai Li, Mo Sun, Yang Shang, Hongxin Wang, Lu Yang, Tingting Ma, Lin Chen, Ying Zhang, Bin Liu, Tong Chen, Wenbo Analysis of the relationship between geography and body color with the genetic diversity in the Echiura worm Urechis unicinctus based on the mitochondrial COI and D-loop sequences |
title | Analysis of the relationship between geography and body color with the genetic diversity in the Echiura worm Urechis unicinctus based on the mitochondrial COI and D-loop sequences |
title_full | Analysis of the relationship between geography and body color with the genetic diversity in the Echiura worm Urechis unicinctus based on the mitochondrial COI and D-loop sequences |
title_fullStr | Analysis of the relationship between geography and body color with the genetic diversity in the Echiura worm Urechis unicinctus based on the mitochondrial COI and D-loop sequences |
title_full_unstemmed | Analysis of the relationship between geography and body color with the genetic diversity in the Echiura worm Urechis unicinctus based on the mitochondrial COI and D-loop sequences |
title_short | Analysis of the relationship between geography and body color with the genetic diversity in the Echiura worm Urechis unicinctus based on the mitochondrial COI and D-loop sequences |
title_sort | analysis of the relationship between geography and body color with the genetic diversity in the echiura worm urechis unicinctus based on the mitochondrial coi and d-loop sequences |
topic | Rapid Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8078999/ https://www.ncbi.nlm.nih.gov/pubmed/33969186 http://dx.doi.org/10.1080/23802359.2021.1910082 |
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