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Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia
Mallotus japonicus is a shrub species in the family of Euphorbiaceae. The study of plastome would be helpful for its phylogenetic study and species identification. The total length of complete plastome for Mallotus japonicus is of 164,912 bp, with typical part-four structure and gene content of angi...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8079058/ https://www.ncbi.nlm.nih.gov/pubmed/33969189 http://dx.doi.org/10.1080/23802359.2021.1911707 |
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author | Wu, Wan-Ping Zhang, Xiao-Feng Zhu, Zhi-Xin Wang, Hua-Feng |
author_facet | Wu, Wan-Ping Zhang, Xiao-Feng Zhu, Zhi-Xin Wang, Hua-Feng |
author_sort | Wu, Wan-Ping |
collection | PubMed |
description | Mallotus japonicus is a shrub species in the family of Euphorbiaceae. The study of plastome would be helpful for its phylogenetic study and species identification. The total length of complete plastome for Mallotus japonicus is of 164,912 bp, with typical part-four structure and gene content of angiosperm plastome, including two inverted repeat (IR) regions of 27,829 bp, a large single-copy (LSC) region of 90,319 bp, and a small single-copy (SSC) region of 18,935 bp. The plastome contains 125 genes, consisting of 80 unique protein-coding genes, 31 unique tRNA gene, four unique rRNA genes (5S rRNA, 4.5S rRNA, 16S rRNA, and 23S rRNA), and five pseudogenes. The overall G/C content in the plastome of Mallotus japonicus is 40.2%. The phylogenetic analysis indicates that M. japonicus is closer to M. peltatus than other species in this study. The complete plastome sequence is conducive to the exploitation and utilization of Euphorbiaceae resources and the phylogenetic study in future. |
format | Online Article Text |
id | pubmed-8079058 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-80790582021-05-06 Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia Wu, Wan-Ping Zhang, Xiao-Feng Zhu, Zhi-Xin Wang, Hua-Feng Mitochondrial DNA B Resour Mitogenome Announcement Mallotus japonicus is a shrub species in the family of Euphorbiaceae. The study of plastome would be helpful for its phylogenetic study and species identification. The total length of complete plastome for Mallotus japonicus is of 164,912 bp, with typical part-four structure and gene content of angiosperm plastome, including two inverted repeat (IR) regions of 27,829 bp, a large single-copy (LSC) region of 90,319 bp, and a small single-copy (SSC) region of 18,935 bp. The plastome contains 125 genes, consisting of 80 unique protein-coding genes, 31 unique tRNA gene, four unique rRNA genes (5S rRNA, 4.5S rRNA, 16S rRNA, and 23S rRNA), and five pseudogenes. The overall G/C content in the plastome of Mallotus japonicus is 40.2%. The phylogenetic analysis indicates that M. japonicus is closer to M. peltatus than other species in this study. The complete plastome sequence is conducive to the exploitation and utilization of Euphorbiaceae resources and the phylogenetic study in future. Taylor & Francis 2021-04-23 /pmc/articles/PMC8079058/ /pubmed/33969189 http://dx.doi.org/10.1080/23802359.2021.1911707 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Wu, Wan-Ping Zhang, Xiao-Feng Zhu, Zhi-Xin Wang, Hua-Feng Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia |
title | Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia |
title_full | Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia |
title_fullStr | Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia |
title_full_unstemmed | Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia |
title_short | Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia |
title_sort | complete plastome sequence of mallotus japonicus (linn. f.) müll. arg. (euphorbiaceae): a medicinal plant species endemic in east asia |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8079058/ https://www.ncbi.nlm.nih.gov/pubmed/33969189 http://dx.doi.org/10.1080/23802359.2021.1911707 |
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