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Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia

Mallotus japonicus is a shrub species in the family of Euphorbiaceae. The study of plastome would be helpful for its phylogenetic study and species identification. The total length of complete plastome for Mallotus japonicus is of 164,912 bp, with typical part-four structure and gene content of angi...

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Autores principales: Wu, Wan-Ping, Zhang, Xiao-Feng, Zhu, Zhi-Xin, Wang, Hua-Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8079058/
https://www.ncbi.nlm.nih.gov/pubmed/33969189
http://dx.doi.org/10.1080/23802359.2021.1911707
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author Wu, Wan-Ping
Zhang, Xiao-Feng
Zhu, Zhi-Xin
Wang, Hua-Feng
author_facet Wu, Wan-Ping
Zhang, Xiao-Feng
Zhu, Zhi-Xin
Wang, Hua-Feng
author_sort Wu, Wan-Ping
collection PubMed
description Mallotus japonicus is a shrub species in the family of Euphorbiaceae. The study of plastome would be helpful for its phylogenetic study and species identification. The total length of complete plastome for Mallotus japonicus is of 164,912 bp, with typical part-four structure and gene content of angiosperm plastome, including two inverted repeat (IR) regions of 27,829 bp, a large single-copy (LSC) region of 90,319 bp, and a small single-copy (SSC) region of 18,935 bp. The plastome contains 125 genes, consisting of 80 unique protein-coding genes, 31 unique tRNA gene, four unique rRNA genes (5S rRNA, 4.5S rRNA, 16S rRNA, and 23S rRNA), and five pseudogenes. The overall G/C content in the plastome of Mallotus japonicus is 40.2%. The phylogenetic analysis indicates that M. japonicus is closer to M. peltatus than other species in this study. The complete plastome sequence is conducive to the exploitation and utilization of Euphorbiaceae resources and the phylogenetic study in future.
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spelling pubmed-80790582021-05-06 Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia Wu, Wan-Ping Zhang, Xiao-Feng Zhu, Zhi-Xin Wang, Hua-Feng Mitochondrial DNA B Resour Mitogenome Announcement Mallotus japonicus is a shrub species in the family of Euphorbiaceae. The study of plastome would be helpful for its phylogenetic study and species identification. The total length of complete plastome for Mallotus japonicus is of 164,912 bp, with typical part-four structure and gene content of angiosperm plastome, including two inverted repeat (IR) regions of 27,829 bp, a large single-copy (LSC) region of 90,319 bp, and a small single-copy (SSC) region of 18,935 bp. The plastome contains 125 genes, consisting of 80 unique protein-coding genes, 31 unique tRNA gene, four unique rRNA genes (5S rRNA, 4.5S rRNA, 16S rRNA, and 23S rRNA), and five pseudogenes. The overall G/C content in the plastome of Mallotus japonicus is 40.2%. The phylogenetic analysis indicates that M. japonicus is closer to M. peltatus than other species in this study. The complete plastome sequence is conducive to the exploitation and utilization of Euphorbiaceae resources and the phylogenetic study in future. Taylor & Francis 2021-04-23 /pmc/articles/PMC8079058/ /pubmed/33969189 http://dx.doi.org/10.1080/23802359.2021.1911707 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wu, Wan-Ping
Zhang, Xiao-Feng
Zhu, Zhi-Xin
Wang, Hua-Feng
Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia
title Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia
title_full Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia
title_fullStr Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia
title_full_unstemmed Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia
title_short Complete plastome sequence of Mallotus japonicus (Linn. f.) Müll. Arg. (Euphorbiaceae): a medicinal plant species endemic in East Asia
title_sort complete plastome sequence of mallotus japonicus (linn. f.) müll. arg. (euphorbiaceae): a medicinal plant species endemic in east asia
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8079058/
https://www.ncbi.nlm.nih.gov/pubmed/33969189
http://dx.doi.org/10.1080/23802359.2021.1911707
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