Complete chloroplast genome sequence of the drought and heat-resistant Chinese alfalfa landrace, Medicago sativa ‘Deqin’

Medicago sativa ‘Deqin’ is an excellent alfalfa landrace with strong drought and heat resistant which can grow and propagate very well in Deqin, a xerothermic valley of Jinsha River, China. In this study, the complete chloroplast genome of M. sativa ‘Deqin’ was assembled. The complete chloroplast ge...

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Autores principales: Zhao, Yan, Zeng, Wanyong, Li, Wanxuan, Bi, Yufen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8079071/
https://www.ncbi.nlm.nih.gov/pubmed/33969203
http://dx.doi.org/10.1080/23802359.2019.1692715
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author Zhao, Yan
Zeng, Wanyong
Li, Wanxuan
Bi, Yufen
author_facet Zhao, Yan
Zeng, Wanyong
Li, Wanxuan
Bi, Yufen
author_sort Zhao, Yan
collection PubMed
description Medicago sativa ‘Deqin’ is an excellent alfalfa landrace with strong drought and heat resistant which can grow and propagate very well in Deqin, a xerothermic valley of Jinsha River, China. In this study, the complete chloroplast genome of M. sativa ‘Deqin’ was assembled. The complete chloroplast genome of M. sativa ‘Deqin’ represents a typical circular with 125,470 bp in length, containing one inverted repeat (IR) region. Gene prediction revealed 110 genes encoding 76 proteins, 30 transfer RNAs, and four ribosome RNAs. Three genes (rps16, rpl22 and infA) are absent. The overall GC content is 33.9%. The phylogenetic analysis revealed that M. sativa ‘Deqin’ belonged to the IR lacking clade, and was closely related to M. sativa with a 100% bootstrap support.
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spelling pubmed-80790712021-05-06 Complete chloroplast genome sequence of the drought and heat-resistant Chinese alfalfa landrace, Medicago sativa ‘Deqin’ Zhao, Yan Zeng, Wanyong Li, Wanxuan Bi, Yufen Mitochondrial DNA B Resour Mitogenome Announcement Medicago sativa ‘Deqin’ is an excellent alfalfa landrace with strong drought and heat resistant which can grow and propagate very well in Deqin, a xerothermic valley of Jinsha River, China. In this study, the complete chloroplast genome of M. sativa ‘Deqin’ was assembled. The complete chloroplast genome of M. sativa ‘Deqin’ represents a typical circular with 125,470 bp in length, containing one inverted repeat (IR) region. Gene prediction revealed 110 genes encoding 76 proteins, 30 transfer RNAs, and four ribosome RNAs. Three genes (rps16, rpl22 and infA) are absent. The overall GC content is 33.9%. The phylogenetic analysis revealed that M. sativa ‘Deqin’ belonged to the IR lacking clade, and was closely related to M. sativa with a 100% bootstrap support. Taylor & Francis 2021-04-26 /pmc/articles/PMC8079071/ /pubmed/33969203 http://dx.doi.org/10.1080/23802359.2019.1692715 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhao, Yan
Zeng, Wanyong
Li, Wanxuan
Bi, Yufen
Complete chloroplast genome sequence of the drought and heat-resistant Chinese alfalfa landrace, Medicago sativa ‘Deqin’
title Complete chloroplast genome sequence of the drought and heat-resistant Chinese alfalfa landrace, Medicago sativa ‘Deqin’
title_full Complete chloroplast genome sequence of the drought and heat-resistant Chinese alfalfa landrace, Medicago sativa ‘Deqin’
title_fullStr Complete chloroplast genome sequence of the drought and heat-resistant Chinese alfalfa landrace, Medicago sativa ‘Deqin’
title_full_unstemmed Complete chloroplast genome sequence of the drought and heat-resistant Chinese alfalfa landrace, Medicago sativa ‘Deqin’
title_short Complete chloroplast genome sequence of the drought and heat-resistant Chinese alfalfa landrace, Medicago sativa ‘Deqin’
title_sort complete chloroplast genome sequence of the drought and heat-resistant chinese alfalfa landrace, medicago sativa ‘deqin’
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8079071/
https://www.ncbi.nlm.nih.gov/pubmed/33969203
http://dx.doi.org/10.1080/23802359.2019.1692715
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