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SID-2 negatively regulates development likely independent of nutritional dsRNA uptake

RNA interference (RNAi) is a gene regulatory mechanism based on RNA-RNA interaction conserved through eukaryotes. Surprisingly, many animals can take-up human-made double stranded RNA (dsRNA) from the environment to initiate RNAi suggesting a mechanism for dsRNA-based information exchange between or...

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Autores principales: Braukmann, Fabian, Jordan, David, Jenkins, Benjamin, Koulman, Albert, Miska, Eric Alexander
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8081039/
https://www.ncbi.nlm.nih.gov/pubmed/33044912
http://dx.doi.org/10.1080/15476286.2020.1827619
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author Braukmann, Fabian
Jordan, David
Jenkins, Benjamin
Koulman, Albert
Miska, Eric Alexander
author_facet Braukmann, Fabian
Jordan, David
Jenkins, Benjamin
Koulman, Albert
Miska, Eric Alexander
author_sort Braukmann, Fabian
collection PubMed
description RNA interference (RNAi) is a gene regulatory mechanism based on RNA-RNA interaction conserved through eukaryotes. Surprisingly, many animals can take-up human-made double stranded RNA (dsRNA) from the environment to initiate RNAi suggesting a mechanism for dsRNA-based information exchange between organisms and their environment. However, no naturally occurring example has been identified since the discovery of the phenomenon 22 years ago. Therefore it remains enigmatic why animals are able to take up dsRNA. Here, we explore other possible functions by performing phenotypic studies of dsRNA uptake deficient sid-2 mutants in Caenorhabditis elegans. We find that SID-2 does not have a nutritional role in feeding experiments using genetic sensitized mutants. Furthermore, we use robot assisted imaging to show that sid-2 mutants accelerate growth rate and, by maternal contribution, body length at hatching. Finally, we perform transcriptome and lipidome analysis showing that sid-2 has no effect on energy storage lipids, but affects signalling lipids and the embryo transcriptome. Overall, these results suggest that sid-2 has mild effects on development and is unlikely functioning in the nutritional uptake of dsRNA. These findings broaden our understanding of the biological role of SID-2 and motivate studies identifying the role of environmental dsRNA uptake.
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spelling pubmed-80810392021-05-13 SID-2 negatively regulates development likely independent of nutritional dsRNA uptake Braukmann, Fabian Jordan, David Jenkins, Benjamin Koulman, Albert Miska, Eric Alexander RNA Biol Research Paper RNA interference (RNAi) is a gene regulatory mechanism based on RNA-RNA interaction conserved through eukaryotes. Surprisingly, many animals can take-up human-made double stranded RNA (dsRNA) from the environment to initiate RNAi suggesting a mechanism for dsRNA-based information exchange between organisms and their environment. However, no naturally occurring example has been identified since the discovery of the phenomenon 22 years ago. Therefore it remains enigmatic why animals are able to take up dsRNA. Here, we explore other possible functions by performing phenotypic studies of dsRNA uptake deficient sid-2 mutants in Caenorhabditis elegans. We find that SID-2 does not have a nutritional role in feeding experiments using genetic sensitized mutants. Furthermore, we use robot assisted imaging to show that sid-2 mutants accelerate growth rate and, by maternal contribution, body length at hatching. Finally, we perform transcriptome and lipidome analysis showing that sid-2 has no effect on energy storage lipids, but affects signalling lipids and the embryo transcriptome. Overall, these results suggest that sid-2 has mild effects on development and is unlikely functioning in the nutritional uptake of dsRNA. These findings broaden our understanding of the biological role of SID-2 and motivate studies identifying the role of environmental dsRNA uptake. Taylor & Francis 2020-10-12 /pmc/articles/PMC8081039/ /pubmed/33044912 http://dx.doi.org/10.1080/15476286.2020.1827619 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Paper
Braukmann, Fabian
Jordan, David
Jenkins, Benjamin
Koulman, Albert
Miska, Eric Alexander
SID-2 negatively regulates development likely independent of nutritional dsRNA uptake
title SID-2 negatively regulates development likely independent of nutritional dsRNA uptake
title_full SID-2 negatively regulates development likely independent of nutritional dsRNA uptake
title_fullStr SID-2 negatively regulates development likely independent of nutritional dsRNA uptake
title_full_unstemmed SID-2 negatively regulates development likely independent of nutritional dsRNA uptake
title_short SID-2 negatively regulates development likely independent of nutritional dsRNA uptake
title_sort sid-2 negatively regulates development likely independent of nutritional dsrna uptake
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8081039/
https://www.ncbi.nlm.nih.gov/pubmed/33044912
http://dx.doi.org/10.1080/15476286.2020.1827619
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