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SID-2 negatively regulates development likely independent of nutritional dsRNA uptake
RNA interference (RNAi) is a gene regulatory mechanism based on RNA-RNA interaction conserved through eukaryotes. Surprisingly, many animals can take-up human-made double stranded RNA (dsRNA) from the environment to initiate RNAi suggesting a mechanism for dsRNA-based information exchange between or...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8081039/ https://www.ncbi.nlm.nih.gov/pubmed/33044912 http://dx.doi.org/10.1080/15476286.2020.1827619 |
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author | Braukmann, Fabian Jordan, David Jenkins, Benjamin Koulman, Albert Miska, Eric Alexander |
author_facet | Braukmann, Fabian Jordan, David Jenkins, Benjamin Koulman, Albert Miska, Eric Alexander |
author_sort | Braukmann, Fabian |
collection | PubMed |
description | RNA interference (RNAi) is a gene regulatory mechanism based on RNA-RNA interaction conserved through eukaryotes. Surprisingly, many animals can take-up human-made double stranded RNA (dsRNA) from the environment to initiate RNAi suggesting a mechanism for dsRNA-based information exchange between organisms and their environment. However, no naturally occurring example has been identified since the discovery of the phenomenon 22 years ago. Therefore it remains enigmatic why animals are able to take up dsRNA. Here, we explore other possible functions by performing phenotypic studies of dsRNA uptake deficient sid-2 mutants in Caenorhabditis elegans. We find that SID-2 does not have a nutritional role in feeding experiments using genetic sensitized mutants. Furthermore, we use robot assisted imaging to show that sid-2 mutants accelerate growth rate and, by maternal contribution, body length at hatching. Finally, we perform transcriptome and lipidome analysis showing that sid-2 has no effect on energy storage lipids, but affects signalling lipids and the embryo transcriptome. Overall, these results suggest that sid-2 has mild effects on development and is unlikely functioning in the nutritional uptake of dsRNA. These findings broaden our understanding of the biological role of SID-2 and motivate studies identifying the role of environmental dsRNA uptake. |
format | Online Article Text |
id | pubmed-8081039 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-80810392021-05-13 SID-2 negatively regulates development likely independent of nutritional dsRNA uptake Braukmann, Fabian Jordan, David Jenkins, Benjamin Koulman, Albert Miska, Eric Alexander RNA Biol Research Paper RNA interference (RNAi) is a gene regulatory mechanism based on RNA-RNA interaction conserved through eukaryotes. Surprisingly, many animals can take-up human-made double stranded RNA (dsRNA) from the environment to initiate RNAi suggesting a mechanism for dsRNA-based information exchange between organisms and their environment. However, no naturally occurring example has been identified since the discovery of the phenomenon 22 years ago. Therefore it remains enigmatic why animals are able to take up dsRNA. Here, we explore other possible functions by performing phenotypic studies of dsRNA uptake deficient sid-2 mutants in Caenorhabditis elegans. We find that SID-2 does not have a nutritional role in feeding experiments using genetic sensitized mutants. Furthermore, we use robot assisted imaging to show that sid-2 mutants accelerate growth rate and, by maternal contribution, body length at hatching. Finally, we perform transcriptome and lipidome analysis showing that sid-2 has no effect on energy storage lipids, but affects signalling lipids and the embryo transcriptome. Overall, these results suggest that sid-2 has mild effects on development and is unlikely functioning in the nutritional uptake of dsRNA. These findings broaden our understanding of the biological role of SID-2 and motivate studies identifying the role of environmental dsRNA uptake. Taylor & Francis 2020-10-12 /pmc/articles/PMC8081039/ /pubmed/33044912 http://dx.doi.org/10.1080/15476286.2020.1827619 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Paper Braukmann, Fabian Jordan, David Jenkins, Benjamin Koulman, Albert Miska, Eric Alexander SID-2 negatively regulates development likely independent of nutritional dsRNA uptake |
title | SID-2 negatively regulates development likely independent of nutritional dsRNA uptake |
title_full | SID-2 negatively regulates development likely independent of nutritional dsRNA uptake |
title_fullStr | SID-2 negatively regulates development likely independent of nutritional dsRNA uptake |
title_full_unstemmed | SID-2 negatively regulates development likely independent of nutritional dsRNA uptake |
title_short | SID-2 negatively regulates development likely independent of nutritional dsRNA uptake |
title_sort | sid-2 negatively regulates development likely independent of nutritional dsrna uptake |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8081039/ https://www.ncbi.nlm.nih.gov/pubmed/33044912 http://dx.doi.org/10.1080/15476286.2020.1827619 |
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