Cargando…
nPhase: an accurate and contiguous phasing method for polyploids
While genome sequencing and assembly are now routine, we do not have a full, precise picture of polyploid genomes. No existing polyploid phasing method provides accurate and contiguous haplotype predictions. We developed nPhase, a ploidy agnostic tool that leverages long reads and accurate short rea...
Autores principales: | Abou Saada, Omar, Tsouris, Andreas, Eberlein, Chris, Friedrich, Anne, Schacherer, Joseph |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8082856/ https://www.ncbi.nlm.nih.gov/pubmed/33926549 http://dx.doi.org/10.1186/s13059-021-02342-x |
Ejemplares similares
-
Different trajectories of polyploidization shape the genomic landscape of the Brettanomyces bruxellensis yeast species
por: Eberlein, Chris, et al.
Publicado: (2021) -
Haplotype threading: accurate polyploid phasing from long reads
por: Schrinner, Sven D., et al.
Publicado: (2020) -
Contiguous and accurate de novo assembly of metazoan genomes with modest long read coverage
por: Chakraborty, Mahul, et al.
Publicado: (2016) -
Diallel panel reveals a significant impact of low-frequency genetic variants on gene expression variation in yeast
por: Tsouris, Andreas, et al.
Publicado: (2023) -
Ploidy-Seq: inferring mutational chronology by sequencing polyploid tumor subpopulations
por: Malhotra, Ankit, et al.
Publicado: (2015)