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Bi-Level Prediction Model for Screening COVID-19 Patients Using Chest X-Ray Images
The ongoing pandemic due to coronavirus disease, commonly abbreviated as COVID-19, has unleashed a major health crisis across the world. Although multiple vaccines have emerged, large scale vaccination have proven to be a major challenge, especially in developing nations. As a result, early detectio...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8084620/ http://dx.doi.org/10.1016/j.bdr.2021.100233 |
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author | Das, Soham Roy, Soumya Deep Malakar, Samir Velásquez, Juan D. Sarkar, Ram |
author_facet | Das, Soham Roy, Soumya Deep Malakar, Samir Velásquez, Juan D. Sarkar, Ram |
author_sort | Das, Soham |
collection | PubMed |
description | The ongoing pandemic due to coronavirus disease, commonly abbreviated as COVID-19, has unleashed a major health crisis across the world. Although multiple vaccines have emerged, large scale vaccination have proven to be a major challenge, especially in developing nations. As a result, early detection still remains a crucial aspect of containing the spread of the virus. The popularly used test for COVID-19 is limited by the availability of test kits and is time-consuming. This has prompted researchers to use chest x-ray (CXR) and chest tomography (CT) scan images of subjects to predict COVID. Many COVID-19 patients also suffer from viral Pneumonia caused by SARS-CoV2 virus. Hence, distinguishing between bacterial and non-COVID Pneumonia is of paramount importance for proper diagnosis of the patients. To this end, in the present work, we have developed a bi-level prediction model of the subjects into normal, Pneumonia and COVID-19 patients by using a shallow learner based classifier on features extracted by VGG19 from the CXR images. The model is used on 3168 images distributed among normal, Pneumonia and COVID classes. We have created a dataset by collating CXR images from various sources like SIRM COVID-19 Database, Chest Imaging (Twitter), COVID-chestxray-dataset and Chest X-Ray Images. The experimental results confirm the superiority of the proposed model (99.26% accuracy) over the best performing single-level classification method (96.74% accuracy). This result is also at par with the many state-of-the-art methods mentioned in literature. The source code is available in the link https://github.com/sdrxc/Bi-level-Prediction-Model-for-Screening-COVID-19-from-Chest-X-ray-Images. |
format | Online Article Text |
id | pubmed-8084620 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-80846202021-05-03 Bi-Level Prediction Model for Screening COVID-19 Patients Using Chest X-Ray Images Das, Soham Roy, Soumya Deep Malakar, Samir Velásquez, Juan D. Sarkar, Ram Big Data Research Article The ongoing pandemic due to coronavirus disease, commonly abbreviated as COVID-19, has unleashed a major health crisis across the world. Although multiple vaccines have emerged, large scale vaccination have proven to be a major challenge, especially in developing nations. As a result, early detection still remains a crucial aspect of containing the spread of the virus. The popularly used test for COVID-19 is limited by the availability of test kits and is time-consuming. This has prompted researchers to use chest x-ray (CXR) and chest tomography (CT) scan images of subjects to predict COVID. Many COVID-19 patients also suffer from viral Pneumonia caused by SARS-CoV2 virus. Hence, distinguishing between bacterial and non-COVID Pneumonia is of paramount importance for proper diagnosis of the patients. To this end, in the present work, we have developed a bi-level prediction model of the subjects into normal, Pneumonia and COVID-19 patients by using a shallow learner based classifier on features extracted by VGG19 from the CXR images. The model is used on 3168 images distributed among normal, Pneumonia and COVID classes. We have created a dataset by collating CXR images from various sources like SIRM COVID-19 Database, Chest Imaging (Twitter), COVID-chestxray-dataset and Chest X-Ray Images. The experimental results confirm the superiority of the proposed model (99.26% accuracy) over the best performing single-level classification method (96.74% accuracy). This result is also at par with the many state-of-the-art methods mentioned in literature. The source code is available in the link https://github.com/sdrxc/Bi-level-Prediction-Model-for-Screening-COVID-19-from-Chest-X-ray-Images. Elsevier Inc. 2021-07-15 2021-04-30 /pmc/articles/PMC8084620/ http://dx.doi.org/10.1016/j.bdr.2021.100233 Text en © 2021 Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Das, Soham Roy, Soumya Deep Malakar, Samir Velásquez, Juan D. Sarkar, Ram Bi-Level Prediction Model for Screening COVID-19 Patients Using Chest X-Ray Images |
title | Bi-Level Prediction Model for Screening COVID-19 Patients Using Chest X-Ray Images |
title_full | Bi-Level Prediction Model for Screening COVID-19 Patients Using Chest X-Ray Images |
title_fullStr | Bi-Level Prediction Model for Screening COVID-19 Patients Using Chest X-Ray Images |
title_full_unstemmed | Bi-Level Prediction Model for Screening COVID-19 Patients Using Chest X-Ray Images |
title_short | Bi-Level Prediction Model for Screening COVID-19 Patients Using Chest X-Ray Images |
title_sort | bi-level prediction model for screening covid-19 patients using chest x-ray images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8084620/ http://dx.doi.org/10.1016/j.bdr.2021.100233 |
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