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Application of regularized regression to identify novel predictors of mortality in a cohort of hemodialysis patients
Cohort studies often provide a large array of data on study participants. The techniques of statistical learning can allow an efficient way to analyze large datasets in order to uncover previously unknown, clinically relevant predictors of morbidity or mortality. We applied a combination of elastic...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8085040/ https://www.ncbi.nlm.nih.gov/pubmed/33927289 http://dx.doi.org/10.1038/s41598-021-88655-0 |
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author | Werfel, Stanislas Lorenz, Georg Haller, Bernhard Günthner, Roman Matschkal, Julia Braunisch, Matthias C. Schaller, Carolin Gundel, Peter Kemmner, Stephan Hayek, Salim S. Nusshag, Christian Reiser, Jochen Moog, Philipp Heemann, Uwe Schmaderer, Christoph |
author_facet | Werfel, Stanislas Lorenz, Georg Haller, Bernhard Günthner, Roman Matschkal, Julia Braunisch, Matthias C. Schaller, Carolin Gundel, Peter Kemmner, Stephan Hayek, Salim S. Nusshag, Christian Reiser, Jochen Moog, Philipp Heemann, Uwe Schmaderer, Christoph |
author_sort | Werfel, Stanislas |
collection | PubMed |
description | Cohort studies often provide a large array of data on study participants. The techniques of statistical learning can allow an efficient way to analyze large datasets in order to uncover previously unknown, clinically relevant predictors of morbidity or mortality. We applied a combination of elastic net penalized Cox regression and stability selection with the aim of identifying novel predictors of mortality in a cohort of prevalent hemodialysis patients. In our analysis we included 475 patients from the “rISk strAtification in end-stage Renal disease” (ISAR) study, who we split into derivation and confirmation cohorts. A wide array of examinations was available for study participants, resulting in over a hundred potential predictors. In the selection approach many of the well established predictors were retrieved in the derivation cohort. Additionally, the serum levels of IL-12p70 and AST were selected as mortality predictors and confirmed in the withheld subgroup. High IL-12p70 levels were specifically prognostic of infection-related mortality. In summary, we demonstrate an approach how statistical learning can be applied to a cohort study to derive novel hypotheses in a data-driven way. Our results suggest a novel role of IL-12p70 in infection-related mortality, while AST is a promising additional biomarker in patients undergoing hemodialysis. |
format | Online Article Text |
id | pubmed-8085040 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-80850402021-05-03 Application of regularized regression to identify novel predictors of mortality in a cohort of hemodialysis patients Werfel, Stanislas Lorenz, Georg Haller, Bernhard Günthner, Roman Matschkal, Julia Braunisch, Matthias C. Schaller, Carolin Gundel, Peter Kemmner, Stephan Hayek, Salim S. Nusshag, Christian Reiser, Jochen Moog, Philipp Heemann, Uwe Schmaderer, Christoph Sci Rep Article Cohort studies often provide a large array of data on study participants. The techniques of statistical learning can allow an efficient way to analyze large datasets in order to uncover previously unknown, clinically relevant predictors of morbidity or mortality. We applied a combination of elastic net penalized Cox regression and stability selection with the aim of identifying novel predictors of mortality in a cohort of prevalent hemodialysis patients. In our analysis we included 475 patients from the “rISk strAtification in end-stage Renal disease” (ISAR) study, who we split into derivation and confirmation cohorts. A wide array of examinations was available for study participants, resulting in over a hundred potential predictors. In the selection approach many of the well established predictors were retrieved in the derivation cohort. Additionally, the serum levels of IL-12p70 and AST were selected as mortality predictors and confirmed in the withheld subgroup. High IL-12p70 levels were specifically prognostic of infection-related mortality. In summary, we demonstrate an approach how statistical learning can be applied to a cohort study to derive novel hypotheses in a data-driven way. Our results suggest a novel role of IL-12p70 in infection-related mortality, while AST is a promising additional biomarker in patients undergoing hemodialysis. Nature Publishing Group UK 2021-04-29 /pmc/articles/PMC8085040/ /pubmed/33927289 http://dx.doi.org/10.1038/s41598-021-88655-0 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Werfel, Stanislas Lorenz, Georg Haller, Bernhard Günthner, Roman Matschkal, Julia Braunisch, Matthias C. Schaller, Carolin Gundel, Peter Kemmner, Stephan Hayek, Salim S. Nusshag, Christian Reiser, Jochen Moog, Philipp Heemann, Uwe Schmaderer, Christoph Application of regularized regression to identify novel predictors of mortality in a cohort of hemodialysis patients |
title | Application of regularized regression to identify novel predictors of mortality in a cohort of hemodialysis patients |
title_full | Application of regularized regression to identify novel predictors of mortality in a cohort of hemodialysis patients |
title_fullStr | Application of regularized regression to identify novel predictors of mortality in a cohort of hemodialysis patients |
title_full_unstemmed | Application of regularized regression to identify novel predictors of mortality in a cohort of hemodialysis patients |
title_short | Application of regularized regression to identify novel predictors of mortality in a cohort of hemodialysis patients |
title_sort | application of regularized regression to identify novel predictors of mortality in a cohort of hemodialysis patients |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8085040/ https://www.ncbi.nlm.nih.gov/pubmed/33927289 http://dx.doi.org/10.1038/s41598-021-88655-0 |
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