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COVID-CT-MD, COVID-19 computed tomography scan dataset applicable in machine learning and deep learning

Novel Coronavirus (COVID-19) has drastically overwhelmed more than 200 countries affecting millions and claiming almost 2 million lives, since its emergence in late 2019. This highly contagious disease can easily spread, and if not controlled in a timely fashion, can rapidly incapacitate healthcare...

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Autores principales: Afshar, Parnian, Heidarian, Shahin, Enshaei, Nastaran, Naderkhani, Farnoosh, Rafiee, Moezedin Javad, Oikonomou, Anastasia, Fard, Faranak Babaki, Samimi, Kaveh, Plataniotis, Konstantinos N., Mohammadi, Arash
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8085195/
https://www.ncbi.nlm.nih.gov/pubmed/33927208
http://dx.doi.org/10.1038/s41597-021-00900-3
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author Afshar, Parnian
Heidarian, Shahin
Enshaei, Nastaran
Naderkhani, Farnoosh
Rafiee, Moezedin Javad
Oikonomou, Anastasia
Fard, Faranak Babaki
Samimi, Kaveh
Plataniotis, Konstantinos N.
Mohammadi, Arash
author_facet Afshar, Parnian
Heidarian, Shahin
Enshaei, Nastaran
Naderkhani, Farnoosh
Rafiee, Moezedin Javad
Oikonomou, Anastasia
Fard, Faranak Babaki
Samimi, Kaveh
Plataniotis, Konstantinos N.
Mohammadi, Arash
author_sort Afshar, Parnian
collection PubMed
description Novel Coronavirus (COVID-19) has drastically overwhelmed more than 200 countries affecting millions and claiming almost 2 million lives, since its emergence in late 2019. This highly contagious disease can easily spread, and if not controlled in a timely fashion, can rapidly incapacitate healthcare systems. The current standard diagnosis method, the Reverse Transcription Polymerase Chain Reaction (RT- PCR), is time consuming, and subject to low sensitivity. Chest Radiograph (CXR), the first imaging modality to be used, is readily available and gives immediate results. However, it has notoriously lower sensitivity than Computed Tomography (CT), which can be used efficiently to complement other diagnostic methods. This paper introduces a new COVID-19 CT scan dataset, referred to as COVID-CT-MD, consisting of not only COVID-19 cases, but also healthy and participants infected by Community Acquired Pneumonia (CAP). COVID-CT-MD dataset, which is accompanied with lobe-level, slice-level and patient-level labels, has the potential to facilitate the COVID-19 research, in particular COVID-CT-MD can assist in development of advanced Machine Learning (ML) and Deep Neural Network (DNN) based solutions.
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spelling pubmed-80851952021-05-05 COVID-CT-MD, COVID-19 computed tomography scan dataset applicable in machine learning and deep learning Afshar, Parnian Heidarian, Shahin Enshaei, Nastaran Naderkhani, Farnoosh Rafiee, Moezedin Javad Oikonomou, Anastasia Fard, Faranak Babaki Samimi, Kaveh Plataniotis, Konstantinos N. Mohammadi, Arash Sci Data Data Descriptor Novel Coronavirus (COVID-19) has drastically overwhelmed more than 200 countries affecting millions and claiming almost 2 million lives, since its emergence in late 2019. This highly contagious disease can easily spread, and if not controlled in a timely fashion, can rapidly incapacitate healthcare systems. The current standard diagnosis method, the Reverse Transcription Polymerase Chain Reaction (RT- PCR), is time consuming, and subject to low sensitivity. Chest Radiograph (CXR), the first imaging modality to be used, is readily available and gives immediate results. However, it has notoriously lower sensitivity than Computed Tomography (CT), which can be used efficiently to complement other diagnostic methods. This paper introduces a new COVID-19 CT scan dataset, referred to as COVID-CT-MD, consisting of not only COVID-19 cases, but also healthy and participants infected by Community Acquired Pneumonia (CAP). COVID-CT-MD dataset, which is accompanied with lobe-level, slice-level and patient-level labels, has the potential to facilitate the COVID-19 research, in particular COVID-CT-MD can assist in development of advanced Machine Learning (ML) and Deep Neural Network (DNN) based solutions. Nature Publishing Group UK 2021-04-29 /pmc/articles/PMC8085195/ /pubmed/33927208 http://dx.doi.org/10.1038/s41597-021-00900-3 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) applies to the metadata files associated with this article.
spellingShingle Data Descriptor
Afshar, Parnian
Heidarian, Shahin
Enshaei, Nastaran
Naderkhani, Farnoosh
Rafiee, Moezedin Javad
Oikonomou, Anastasia
Fard, Faranak Babaki
Samimi, Kaveh
Plataniotis, Konstantinos N.
Mohammadi, Arash
COVID-CT-MD, COVID-19 computed tomography scan dataset applicable in machine learning and deep learning
title COVID-CT-MD, COVID-19 computed tomography scan dataset applicable in machine learning and deep learning
title_full COVID-CT-MD, COVID-19 computed tomography scan dataset applicable in machine learning and deep learning
title_fullStr COVID-CT-MD, COVID-19 computed tomography scan dataset applicable in machine learning and deep learning
title_full_unstemmed COVID-CT-MD, COVID-19 computed tomography scan dataset applicable in machine learning and deep learning
title_short COVID-CT-MD, COVID-19 computed tomography scan dataset applicable in machine learning and deep learning
title_sort covid-ct-md, covid-19 computed tomography scan dataset applicable in machine learning and deep learning
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8085195/
https://www.ncbi.nlm.nih.gov/pubmed/33927208
http://dx.doi.org/10.1038/s41597-021-00900-3
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