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Zebrafish automatic monitoring system for conditioning and behavioral analysis

Studies using zebrafish (Danio rerio) in neuro-behavioural research are growing. Measuring fish behavior by computational methods is one of the most efficient ways to avoid human bias in experimental analyses, extending them to various approaches. Sometimes, thorough analyses are difficult to do, as...

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Autores principales: Barreiros, Marta de Oliveira, Barbosa, Felipe Gomes, Dantas, Diego de Oliveira, Santos, Daniel de Matos Luna dos, Ribeiro, Sidarta, Santos, Giselle Cutrim de Oliveira, Barros, Allan Kardec
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8085222/
https://www.ncbi.nlm.nih.gov/pubmed/33927213
http://dx.doi.org/10.1038/s41598-021-87502-6
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author Barreiros, Marta de Oliveira
Barbosa, Felipe Gomes
Dantas, Diego de Oliveira
Santos, Daniel de Matos Luna dos
Ribeiro, Sidarta
Santos, Giselle Cutrim de Oliveira
Barros, Allan Kardec
author_facet Barreiros, Marta de Oliveira
Barbosa, Felipe Gomes
Dantas, Diego de Oliveira
Santos, Daniel de Matos Luna dos
Ribeiro, Sidarta
Santos, Giselle Cutrim de Oliveira
Barros, Allan Kardec
author_sort Barreiros, Marta de Oliveira
collection PubMed
description Studies using zebrafish (Danio rerio) in neuro-behavioural research are growing. Measuring fish behavior by computational methods is one of the most efficient ways to avoid human bias in experimental analyses, extending them to various approaches. Sometimes, thorough analyses are difficult to do, as fish can behave unpredictably during an experimental strategy. However, the analyses can be implemented in an automated way, using an online strategy and video processing for a complete assessment of the zebrafish behavior, based on the detection and tracking of fish during an activity. Here, a fully automatic conditioning and detailed analysis of zebrafish behavior is presented. Microcontrolled components were used to control the delivery of visual and sound stimuli, in addition to the concise amounts of food after conditioned stimuli for adult zebrafish groups in a conventional tank. The images were captured and processed for automatic detection of the fish, and the training of the fish was done in two evaluation strategies: simple and complex. In simple conditioning, the zebrafish showed significant responses from the second attempt, learning that the conditioned stimulus was a predictor of food presentation in a specific space of the tank, where the food was dumped. When the fish were subjected to two stimuli for decision-making in the food reward, the zebrafish obtained better responses to red light stimuli in relation to vibration. The behavior change was clear in stimulated fish in relation to the control group, thus, the distances traveled and the speed were greater, while the polarization was lower in stimulated fish. This automated system allows for the conditioning and assessment of zebrafish behavior online, with greater stability in experiments, and in the analysis of the behavior of individual fish or fish schools, including learning and memory studies.
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spelling pubmed-80852222021-05-03 Zebrafish automatic monitoring system for conditioning and behavioral analysis Barreiros, Marta de Oliveira Barbosa, Felipe Gomes Dantas, Diego de Oliveira Santos, Daniel de Matos Luna dos Ribeiro, Sidarta Santos, Giselle Cutrim de Oliveira Barros, Allan Kardec Sci Rep Article Studies using zebrafish (Danio rerio) in neuro-behavioural research are growing. Measuring fish behavior by computational methods is one of the most efficient ways to avoid human bias in experimental analyses, extending them to various approaches. Sometimes, thorough analyses are difficult to do, as fish can behave unpredictably during an experimental strategy. However, the analyses can be implemented in an automated way, using an online strategy and video processing for a complete assessment of the zebrafish behavior, based on the detection and tracking of fish during an activity. Here, a fully automatic conditioning and detailed analysis of zebrafish behavior is presented. Microcontrolled components were used to control the delivery of visual and sound stimuli, in addition to the concise amounts of food after conditioned stimuli for adult zebrafish groups in a conventional tank. The images were captured and processed for automatic detection of the fish, and the training of the fish was done in two evaluation strategies: simple and complex. In simple conditioning, the zebrafish showed significant responses from the second attempt, learning that the conditioned stimulus was a predictor of food presentation in a specific space of the tank, where the food was dumped. When the fish were subjected to two stimuli for decision-making in the food reward, the zebrafish obtained better responses to red light stimuli in relation to vibration. The behavior change was clear in stimulated fish in relation to the control group, thus, the distances traveled and the speed were greater, while the polarization was lower in stimulated fish. This automated system allows for the conditioning and assessment of zebrafish behavior online, with greater stability in experiments, and in the analysis of the behavior of individual fish or fish schools, including learning and memory studies. Nature Publishing Group UK 2021-04-29 /pmc/articles/PMC8085222/ /pubmed/33927213 http://dx.doi.org/10.1038/s41598-021-87502-6 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Barreiros, Marta de Oliveira
Barbosa, Felipe Gomes
Dantas, Diego de Oliveira
Santos, Daniel de Matos Luna dos
Ribeiro, Sidarta
Santos, Giselle Cutrim de Oliveira
Barros, Allan Kardec
Zebrafish automatic monitoring system for conditioning and behavioral analysis
title Zebrafish automatic monitoring system for conditioning and behavioral analysis
title_full Zebrafish automatic monitoring system for conditioning and behavioral analysis
title_fullStr Zebrafish automatic monitoring system for conditioning and behavioral analysis
title_full_unstemmed Zebrafish automatic monitoring system for conditioning and behavioral analysis
title_short Zebrafish automatic monitoring system for conditioning and behavioral analysis
title_sort zebrafish automatic monitoring system for conditioning and behavioral analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8085222/
https://www.ncbi.nlm.nih.gov/pubmed/33927213
http://dx.doi.org/10.1038/s41598-021-87502-6
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