Cargando…

Establishing Machine Learning Models to Predict Curative Resection in Early Gastric Cancer with Undifferentiated Histology: Development and Usability Study

BACKGROUND: Undifferentiated type of early gastric cancer (U-EGC) is included among the expanded indications of endoscopic submucosal dissection (ESD); however, the rate of curative resection remains unsatisfactory. Endoscopists predict the probability of curative resection by considering the size a...

Descripción completa

Detalles Bibliográficos
Autores principales: Bang, Chang Seok, Ahn, Ji Yong, Kim, Jie-Hyun, Kim, Young-Il, Choi, Il Ju, Shin, Woon Geon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8085749/
https://www.ncbi.nlm.nih.gov/pubmed/33856358
http://dx.doi.org/10.2196/25053
_version_ 1783686409708634112
author Bang, Chang Seok
Ahn, Ji Yong
Kim, Jie-Hyun
Kim, Young-Il
Choi, Il Ju
Shin, Woon Geon
author_facet Bang, Chang Seok
Ahn, Ji Yong
Kim, Jie-Hyun
Kim, Young-Il
Choi, Il Ju
Shin, Woon Geon
author_sort Bang, Chang Seok
collection PubMed
description BACKGROUND: Undifferentiated type of early gastric cancer (U-EGC) is included among the expanded indications of endoscopic submucosal dissection (ESD); however, the rate of curative resection remains unsatisfactory. Endoscopists predict the probability of curative resection by considering the size and shape of the lesion and whether ulcers are present or not. The location of the lesion, indicating the likely technical difficulty, is also considered. OBJECTIVE: The aim of this study was to establish machine learning (ML) models to better predict the possibility of curative resection in U-EGC prior to ESD. METHODS: A nationwide cohort of 2703 U-EGCs treated by ESD or surgery were adopted for the training and internal validation cohorts. Separately, an independent data set of the Korean ESD registry (n=275) and an Asan medical center data set (n=127) treated by ESD were chosen for external validation. Eighteen ML classifiers were selected to establish prediction models of curative resection with the following variables: age; sex; location, size, and shape of the lesion; and whether ulcers were present or not. RESULTS: Among the 18 models, the extreme gradient boosting classifier showed the best performance (internal validation accuracy 93.4%, 95% CI 90.4%-96.4%; precision 92.6%, 95% CI 89.5%-95.7%; recall 99.0%, 95% CI 97.8%-99.9%; and F1 score 95.7%, 95% CI 93.3%-98.1%). Attempts at external validation showed substantial accuracy (first external validation 81.5%, 95% CI 76.9%-86.1% and second external validation 89.8%, 95% CI 84.5%-95.1%). Lesion size was the most important feature in each explainable artificial intelligence analysis. CONCLUSIONS: We established an ML model capable of accurately predicting the curative resection of U-EGC before ESD by considering the morphological and ecological characteristics of the lesions.
format Online
Article
Text
id pubmed-8085749
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher JMIR Publications
record_format MEDLINE/PubMed
spelling pubmed-80857492021-05-06 Establishing Machine Learning Models to Predict Curative Resection in Early Gastric Cancer with Undifferentiated Histology: Development and Usability Study Bang, Chang Seok Ahn, Ji Yong Kim, Jie-Hyun Kim, Young-Il Choi, Il Ju Shin, Woon Geon J Med Internet Res Original Paper BACKGROUND: Undifferentiated type of early gastric cancer (U-EGC) is included among the expanded indications of endoscopic submucosal dissection (ESD); however, the rate of curative resection remains unsatisfactory. Endoscopists predict the probability of curative resection by considering the size and shape of the lesion and whether ulcers are present or not. The location of the lesion, indicating the likely technical difficulty, is also considered. OBJECTIVE: The aim of this study was to establish machine learning (ML) models to better predict the possibility of curative resection in U-EGC prior to ESD. METHODS: A nationwide cohort of 2703 U-EGCs treated by ESD or surgery were adopted for the training and internal validation cohorts. Separately, an independent data set of the Korean ESD registry (n=275) and an Asan medical center data set (n=127) treated by ESD were chosen for external validation. Eighteen ML classifiers were selected to establish prediction models of curative resection with the following variables: age; sex; location, size, and shape of the lesion; and whether ulcers were present or not. RESULTS: Among the 18 models, the extreme gradient boosting classifier showed the best performance (internal validation accuracy 93.4%, 95% CI 90.4%-96.4%; precision 92.6%, 95% CI 89.5%-95.7%; recall 99.0%, 95% CI 97.8%-99.9%; and F1 score 95.7%, 95% CI 93.3%-98.1%). Attempts at external validation showed substantial accuracy (first external validation 81.5%, 95% CI 76.9%-86.1% and second external validation 89.8%, 95% CI 84.5%-95.1%). Lesion size was the most important feature in each explainable artificial intelligence analysis. CONCLUSIONS: We established an ML model capable of accurately predicting the curative resection of U-EGC before ESD by considering the morphological and ecological characteristics of the lesions. JMIR Publications 2021-04-15 /pmc/articles/PMC8085749/ /pubmed/33856358 http://dx.doi.org/10.2196/25053 Text en ©Chang Seok Bang, Ji Yong Ahn, Jie-Hyun Kim, Young-Il Kim, Il Ju Choi, Woon Geon Shin. Originally published in the Journal of Medical Internet Research (http://www.jmir.org), 15.04.2021. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in the Journal of Medical Internet Research, is properly cited. The complete bibliographic information, a link to the original publication on http://www.jmir.org/, as well as this copyright and license information must be included.
spellingShingle Original Paper
Bang, Chang Seok
Ahn, Ji Yong
Kim, Jie-Hyun
Kim, Young-Il
Choi, Il Ju
Shin, Woon Geon
Establishing Machine Learning Models to Predict Curative Resection in Early Gastric Cancer with Undifferentiated Histology: Development and Usability Study
title Establishing Machine Learning Models to Predict Curative Resection in Early Gastric Cancer with Undifferentiated Histology: Development and Usability Study
title_full Establishing Machine Learning Models to Predict Curative Resection in Early Gastric Cancer with Undifferentiated Histology: Development and Usability Study
title_fullStr Establishing Machine Learning Models to Predict Curative Resection in Early Gastric Cancer with Undifferentiated Histology: Development and Usability Study
title_full_unstemmed Establishing Machine Learning Models to Predict Curative Resection in Early Gastric Cancer with Undifferentiated Histology: Development and Usability Study
title_short Establishing Machine Learning Models to Predict Curative Resection in Early Gastric Cancer with Undifferentiated Histology: Development and Usability Study
title_sort establishing machine learning models to predict curative resection in early gastric cancer with undifferentiated histology: development and usability study
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8085749/
https://www.ncbi.nlm.nih.gov/pubmed/33856358
http://dx.doi.org/10.2196/25053
work_keys_str_mv AT bangchangseok establishingmachinelearningmodelstopredictcurativeresectioninearlygastriccancerwithundifferentiatedhistologydevelopmentandusabilitystudy
AT ahnjiyong establishingmachinelearningmodelstopredictcurativeresectioninearlygastriccancerwithundifferentiatedhistologydevelopmentandusabilitystudy
AT kimjiehyun establishingmachinelearningmodelstopredictcurativeresectioninearlygastriccancerwithundifferentiatedhistologydevelopmentandusabilitystudy
AT kimyoungil establishingmachinelearningmodelstopredictcurativeresectioninearlygastriccancerwithundifferentiatedhistologydevelopmentandusabilitystudy
AT choiilju establishingmachinelearningmodelstopredictcurativeresectioninearlygastriccancerwithundifferentiatedhistologydevelopmentandusabilitystudy
AT shinwoongeon establishingmachinelearningmodelstopredictcurativeresectioninearlygastriccancerwithundifferentiatedhistologydevelopmentandusabilitystudy