Cargando…
Searching for universal model of amyloid signaling motifs using probabilistic context-free grammars
BACKGROUND: Amyloid signaling motifs are a class of protein motifs which share basic structural and functional features despite the lack of clear sequence homology. They are hard to detect in large sequence databases either with the alignment-based profile methods (due to short length and diversity)...
Autores principales: | Dyrka, Witold, Gąsior-Głogowska, Marlena, Szefczyk, Monika, Szulc, Natalia |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8086366/ https://www.ncbi.nlm.nih.gov/pubmed/33926372 http://dx.doi.org/10.1186/s12859-021-04139-y |
Ejemplares similares
-
Exploring a diverse world of effector domains and amyloid signaling motifs in fungal NLR proteins
por: Wojciechowski, Jakub W., et al.
Publicado: (2022) -
Estimating probabilistic context-free grammars for proteins using contact map constraints
por: Dyrka, Witold, et al.
Publicado: (2019) -
Variability of Amyloid Propensity in Imperfect Repeats of CsgA Protein of Salmonella enterica and Escherichia coli
por: Szulc, Natalia, et al.
Publicado: (2021) -
A stochastic context free grammar based framework for analysis of protein sequences
por: Dyrka, Witold, et al.
Publicado: (2009) -
Theme and variations: evolutionary diversification of the HET-s functional amyloid motif
por: Daskalov, Asen, et al.
Publicado: (2015)