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Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chicken

A Gram-positive, coccobacillus, white raised and circular with an entire edge colony, and obligately anaerobic bacterium, strain SW178 was isolated from the cecum content of feral chickens in Brookings, South Dakota, USA. The most closely related strain based on 16S rRNA gene sequence analysis of st...

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Autores principales: Wongkuna, Supapit, Ghimire, Sudeep, Chankhamhaengdecha, Surang, Janvilisri, Tavan, Scaria, Joy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8086573/
https://www.ncbi.nlm.nih.gov/pubmed/33986975
http://dx.doi.org/10.7717/peerj.11050
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author Wongkuna, Supapit
Ghimire, Sudeep
Chankhamhaengdecha, Surang
Janvilisri, Tavan
Scaria, Joy
author_facet Wongkuna, Supapit
Ghimire, Sudeep
Chankhamhaengdecha, Surang
Janvilisri, Tavan
Scaria, Joy
author_sort Wongkuna, Supapit
collection PubMed
description A Gram-positive, coccobacillus, white raised and circular with an entire edge colony, and obligately anaerobic bacterium, strain SW178 was isolated from the cecum content of feral chickens in Brookings, South Dakota, USA. The most closely related strain based on 16S rRNA gene sequence analysis of strain SW178 was Mediterraneibacter torques ATCC 27756(T) (Ruminococcus torques ATCC 27756(T)) with 96.94% similarity. The genome of strain SW178 is 3.18 Mbp with G+C content of 46.9 mol%. The optimal temperature and pH for growth in modified brain heart infusion (BHI-M) medium were 45 °C and pH 7.5, respectively. The sole carbon sources of the strain were dextrin, L-fucose, D-galacturonic, α-D-glucose, L-rhamnose and D-sorbitol. The primary cellular fatty acids were C(14 : 0), C(16 : 0) and C(16 : 0) dimethyl acetal (DMA). Based on the genotypic and phenotypic comparison, we proposed that strain SW178 belong to the genus Mediterraneibacter in the family Lachnospiraceae as a novel species, in which the name Mediterraneibacter catenae is proposed. The type strain is SW178 (= DSM 109242(T) = CCOS 1886(T)).
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spelling pubmed-80865732021-05-12 Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chicken Wongkuna, Supapit Ghimire, Sudeep Chankhamhaengdecha, Surang Janvilisri, Tavan Scaria, Joy PeerJ Ecology A Gram-positive, coccobacillus, white raised and circular with an entire edge colony, and obligately anaerobic bacterium, strain SW178 was isolated from the cecum content of feral chickens in Brookings, South Dakota, USA. The most closely related strain based on 16S rRNA gene sequence analysis of strain SW178 was Mediterraneibacter torques ATCC 27756(T) (Ruminococcus torques ATCC 27756(T)) with 96.94% similarity. The genome of strain SW178 is 3.18 Mbp with G+C content of 46.9 mol%. The optimal temperature and pH for growth in modified brain heart infusion (BHI-M) medium were 45 °C and pH 7.5, respectively. The sole carbon sources of the strain were dextrin, L-fucose, D-galacturonic, α-D-glucose, L-rhamnose and D-sorbitol. The primary cellular fatty acids were C(14 : 0), C(16 : 0) and C(16 : 0) dimethyl acetal (DMA). Based on the genotypic and phenotypic comparison, we proposed that strain SW178 belong to the genus Mediterraneibacter in the family Lachnospiraceae as a novel species, in which the name Mediterraneibacter catenae is proposed. The type strain is SW178 (= DSM 109242(T) = CCOS 1886(T)). PeerJ Inc. 2021-04-27 /pmc/articles/PMC8086573/ /pubmed/33986975 http://dx.doi.org/10.7717/peerj.11050 Text en © 2021 Wongkuna et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Ecology
Wongkuna, Supapit
Ghimire, Sudeep
Chankhamhaengdecha, Surang
Janvilisri, Tavan
Scaria, Joy
Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chicken
title Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chicken
title_full Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chicken
title_fullStr Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chicken
title_full_unstemmed Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chicken
title_short Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chicken
title_sort mediterraneibacter catenae sw178 sp. nov., an intestinal bacterium of feral chicken
topic Ecology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8086573/
https://www.ncbi.nlm.nih.gov/pubmed/33986975
http://dx.doi.org/10.7717/peerj.11050
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