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Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chicken
A Gram-positive, coccobacillus, white raised and circular with an entire edge colony, and obligately anaerobic bacterium, strain SW178 was isolated from the cecum content of feral chickens in Brookings, South Dakota, USA. The most closely related strain based on 16S rRNA gene sequence analysis of st...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8086573/ https://www.ncbi.nlm.nih.gov/pubmed/33986975 http://dx.doi.org/10.7717/peerj.11050 |
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author | Wongkuna, Supapit Ghimire, Sudeep Chankhamhaengdecha, Surang Janvilisri, Tavan Scaria, Joy |
author_facet | Wongkuna, Supapit Ghimire, Sudeep Chankhamhaengdecha, Surang Janvilisri, Tavan Scaria, Joy |
author_sort | Wongkuna, Supapit |
collection | PubMed |
description | A Gram-positive, coccobacillus, white raised and circular with an entire edge colony, and obligately anaerobic bacterium, strain SW178 was isolated from the cecum content of feral chickens in Brookings, South Dakota, USA. The most closely related strain based on 16S rRNA gene sequence analysis of strain SW178 was Mediterraneibacter torques ATCC 27756(T) (Ruminococcus torques ATCC 27756(T)) with 96.94% similarity. The genome of strain SW178 is 3.18 Mbp with G+C content of 46.9 mol%. The optimal temperature and pH for growth in modified brain heart infusion (BHI-M) medium were 45 °C and pH 7.5, respectively. The sole carbon sources of the strain were dextrin, L-fucose, D-galacturonic, α-D-glucose, L-rhamnose and D-sorbitol. The primary cellular fatty acids were C(14 : 0), C(16 : 0) and C(16 : 0) dimethyl acetal (DMA). Based on the genotypic and phenotypic comparison, we proposed that strain SW178 belong to the genus Mediterraneibacter in the family Lachnospiraceae as a novel species, in which the name Mediterraneibacter catenae is proposed. The type strain is SW178 (= DSM 109242(T) = CCOS 1886(T)). |
format | Online Article Text |
id | pubmed-8086573 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-80865732021-05-12 Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chicken Wongkuna, Supapit Ghimire, Sudeep Chankhamhaengdecha, Surang Janvilisri, Tavan Scaria, Joy PeerJ Ecology A Gram-positive, coccobacillus, white raised and circular with an entire edge colony, and obligately anaerobic bacterium, strain SW178 was isolated from the cecum content of feral chickens in Brookings, South Dakota, USA. The most closely related strain based on 16S rRNA gene sequence analysis of strain SW178 was Mediterraneibacter torques ATCC 27756(T) (Ruminococcus torques ATCC 27756(T)) with 96.94% similarity. The genome of strain SW178 is 3.18 Mbp with G+C content of 46.9 mol%. The optimal temperature and pH for growth in modified brain heart infusion (BHI-M) medium were 45 °C and pH 7.5, respectively. The sole carbon sources of the strain were dextrin, L-fucose, D-galacturonic, α-D-glucose, L-rhamnose and D-sorbitol. The primary cellular fatty acids were C(14 : 0), C(16 : 0) and C(16 : 0) dimethyl acetal (DMA). Based on the genotypic and phenotypic comparison, we proposed that strain SW178 belong to the genus Mediterraneibacter in the family Lachnospiraceae as a novel species, in which the name Mediterraneibacter catenae is proposed. The type strain is SW178 (= DSM 109242(T) = CCOS 1886(T)). PeerJ Inc. 2021-04-27 /pmc/articles/PMC8086573/ /pubmed/33986975 http://dx.doi.org/10.7717/peerj.11050 Text en © 2021 Wongkuna et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Ecology Wongkuna, Supapit Ghimire, Sudeep Chankhamhaengdecha, Surang Janvilisri, Tavan Scaria, Joy Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chicken |
title | Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chicken |
title_full | Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chicken |
title_fullStr | Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chicken |
title_full_unstemmed | Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chicken |
title_short | Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chicken |
title_sort | mediterraneibacter catenae sw178 sp. nov., an intestinal bacterium of feral chicken |
topic | Ecology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8086573/ https://www.ncbi.nlm.nih.gov/pubmed/33986975 http://dx.doi.org/10.7717/peerj.11050 |
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