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Intra-database validation of case-identifying algorithms using reconstituted electronic health records from healthcare claims data
BACKGROUND: Diagnosis performances of case-identifying algorithms developed in healthcare database are usually assessed by comparing identified cases with an external data source. When this is not feasible, intra-database validation can present an appropriate alternative. OBJECTIVES: To illustrate t...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8088022/ https://www.ncbi.nlm.nih.gov/pubmed/33933001 http://dx.doi.org/10.1186/s12874-021-01285-y |
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author | Thurin, Nicolas H. Bosco-Levy, Pauline Blin, Patrick Rouyer, Magali Jové, Jérémy Lamarque, Stéphanie Lignot, Séverine Lassalle, Régis Abouelfath, Abdelilah Bignon, Emmanuelle Diez, Pauline Gross-Goupil, Marine Soulié, Michel Roumiguié, Mathieu Le Moulec, Sylvestre Debouverie, Marc Brochet, Bruno Guillemin, Francis Louapre, Céline Maillart, Elisabeth Heinzlef, Olivier Moore, Nicholas Droz-Perroteau, Cécile |
author_facet | Thurin, Nicolas H. Bosco-Levy, Pauline Blin, Patrick Rouyer, Magali Jové, Jérémy Lamarque, Stéphanie Lignot, Séverine Lassalle, Régis Abouelfath, Abdelilah Bignon, Emmanuelle Diez, Pauline Gross-Goupil, Marine Soulié, Michel Roumiguié, Mathieu Le Moulec, Sylvestre Debouverie, Marc Brochet, Bruno Guillemin, Francis Louapre, Céline Maillart, Elisabeth Heinzlef, Olivier Moore, Nicholas Droz-Perroteau, Cécile |
author_sort | Thurin, Nicolas H. |
collection | PubMed |
description | BACKGROUND: Diagnosis performances of case-identifying algorithms developed in healthcare database are usually assessed by comparing identified cases with an external data source. When this is not feasible, intra-database validation can present an appropriate alternative. OBJECTIVES: To illustrate through two practical examples how to perform intra-database validations of case-identifying algorithms using reconstituted Electronic Health Records (rEHRs). METHODS: Patients with 1) multiple sclerosis (MS) relapses and 2) metastatic castration-resistant prostate cancer (mCRPC) were identified in the French nationwide healthcare database (SNDS) using two case-identifying algorithms. A validation study was then conducted to estimate diagnostic performances of these algorithms through the calculation of their positive predictive value (PPV) and negative predictive value (NPV). To that end, anonymized rEHRs were generated based on the overall information captured in the SNDS over time (e.g. procedure, hospital stays, drug dispensing, medical visits) for a random selection of patients identified as cases or non-cases according to the predefined algorithms. For each disease, an independent validation committee reviewed the rEHRs of 100 cases and 100 non-cases in order to adjudicate on the status of the selected patients (true case/ true non-case), blinded with respect to the result of the corresponding algorithm. RESULTS: Algorithm for relapses identification in MS showed a 95% PPV and 100% NPV. Algorithm for mCRPC identification showed a 97% PPV and 99% NPV. CONCLUSION: The use of rEHRs to conduct an intra-database validation appears to be a valuable tool to estimate the performances of a case-identifying algorithm and assess its validity, in the absence of alternative. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-021-01285-y. |
format | Online Article Text |
id | pubmed-8088022 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-80880222021-05-03 Intra-database validation of case-identifying algorithms using reconstituted electronic health records from healthcare claims data Thurin, Nicolas H. Bosco-Levy, Pauline Blin, Patrick Rouyer, Magali Jové, Jérémy Lamarque, Stéphanie Lignot, Séverine Lassalle, Régis Abouelfath, Abdelilah Bignon, Emmanuelle Diez, Pauline Gross-Goupil, Marine Soulié, Michel Roumiguié, Mathieu Le Moulec, Sylvestre Debouverie, Marc Brochet, Bruno Guillemin, Francis Louapre, Céline Maillart, Elisabeth Heinzlef, Olivier Moore, Nicholas Droz-Perroteau, Cécile BMC Med Res Methodol Research Article BACKGROUND: Diagnosis performances of case-identifying algorithms developed in healthcare database are usually assessed by comparing identified cases with an external data source. When this is not feasible, intra-database validation can present an appropriate alternative. OBJECTIVES: To illustrate through two practical examples how to perform intra-database validations of case-identifying algorithms using reconstituted Electronic Health Records (rEHRs). METHODS: Patients with 1) multiple sclerosis (MS) relapses and 2) metastatic castration-resistant prostate cancer (mCRPC) were identified in the French nationwide healthcare database (SNDS) using two case-identifying algorithms. A validation study was then conducted to estimate diagnostic performances of these algorithms through the calculation of their positive predictive value (PPV) and negative predictive value (NPV). To that end, anonymized rEHRs were generated based on the overall information captured in the SNDS over time (e.g. procedure, hospital stays, drug dispensing, medical visits) for a random selection of patients identified as cases or non-cases according to the predefined algorithms. For each disease, an independent validation committee reviewed the rEHRs of 100 cases and 100 non-cases in order to adjudicate on the status of the selected patients (true case/ true non-case), blinded with respect to the result of the corresponding algorithm. RESULTS: Algorithm for relapses identification in MS showed a 95% PPV and 100% NPV. Algorithm for mCRPC identification showed a 97% PPV and 99% NPV. CONCLUSION: The use of rEHRs to conduct an intra-database validation appears to be a valuable tool to estimate the performances of a case-identifying algorithm and assess its validity, in the absence of alternative. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-021-01285-y. BioMed Central 2021-05-01 /pmc/articles/PMC8088022/ /pubmed/33933001 http://dx.doi.org/10.1186/s12874-021-01285-y Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Thurin, Nicolas H. Bosco-Levy, Pauline Blin, Patrick Rouyer, Magali Jové, Jérémy Lamarque, Stéphanie Lignot, Séverine Lassalle, Régis Abouelfath, Abdelilah Bignon, Emmanuelle Diez, Pauline Gross-Goupil, Marine Soulié, Michel Roumiguié, Mathieu Le Moulec, Sylvestre Debouverie, Marc Brochet, Bruno Guillemin, Francis Louapre, Céline Maillart, Elisabeth Heinzlef, Olivier Moore, Nicholas Droz-Perroteau, Cécile Intra-database validation of case-identifying algorithms using reconstituted electronic health records from healthcare claims data |
title | Intra-database validation of case-identifying algorithms using reconstituted electronic health records from healthcare claims data |
title_full | Intra-database validation of case-identifying algorithms using reconstituted electronic health records from healthcare claims data |
title_fullStr | Intra-database validation of case-identifying algorithms using reconstituted electronic health records from healthcare claims data |
title_full_unstemmed | Intra-database validation of case-identifying algorithms using reconstituted electronic health records from healthcare claims data |
title_short | Intra-database validation of case-identifying algorithms using reconstituted electronic health records from healthcare claims data |
title_sort | intra-database validation of case-identifying algorithms using reconstituted electronic health records from healthcare claims data |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8088022/ https://www.ncbi.nlm.nih.gov/pubmed/33933001 http://dx.doi.org/10.1186/s12874-021-01285-y |
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