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Trans-Ancestry Mutation Landscape of Hepatoblastoma Genomes in Children
Hepatoblastoma (HB) is the most common malignant tumor in the liver of infants and young children. The incidence rate varies among different populations. However, genetic differences in HB patients with different epidemiological and ancestral backgrounds have not been found. In this study, we aim to...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8096978/ https://www.ncbi.nlm.nih.gov/pubmed/33968779 http://dx.doi.org/10.3389/fonc.2021.669560 |
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author | Liu, Jie Gao, Chengwen Wang, Liping Jian, Xuemin Ma, Mingdi Li, Tong Hao, XiWei Zhang, Qian Chen, Yuanbin Zhao, Jing Niu, Haitao Zhu, Chengzhan Zhao, Jie Xia, Nan Li, Zhiqiang Dong, Qian |
author_facet | Liu, Jie Gao, Chengwen Wang, Liping Jian, Xuemin Ma, Mingdi Li, Tong Hao, XiWei Zhang, Qian Chen, Yuanbin Zhao, Jing Niu, Haitao Zhu, Chengzhan Zhao, Jie Xia, Nan Li, Zhiqiang Dong, Qian |
author_sort | Liu, Jie |
collection | PubMed |
description | Hepatoblastoma (HB) is the most common malignant tumor in the liver of infants and young children. The incidence rate varies among different populations. However, genetic differences in HB patients with different epidemiological and ancestral backgrounds have not been found. In this study, we aim to analyze data from 16 patients treated at our center and collected published data from whole-exome sequencing studies on HB, and to explore the genetic differences between races. Data from a total of 75 HB patients of three races (24 Asian, 37 Caucasian and 14 Hispanic) were analyzed. We identified 16 genes with recurrent somatic mutations and 7 core pathway modules. Among them, the Wnt/β-catenin pathway had the highest mutation rate, and the mutation frequency in Caucasians and Hispanics was approximately twice as high as that in Asians. In addition, this study compared the characteristics of gene mutations between patients who underwent preoperative chemotherapy and those who did not and found that there was no significant difference in gene mutations between the two groups. We also preliminarily verified the function of cancer-associated candidate genes (CTNNB1 and KMT2D). In conclusion, we found ethnic differences in HB biology at the genomic level, which expands our understanding of the genetics of HB in children. |
format | Online Article Text |
id | pubmed-8096978 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-80969782021-05-06 Trans-Ancestry Mutation Landscape of Hepatoblastoma Genomes in Children Liu, Jie Gao, Chengwen Wang, Liping Jian, Xuemin Ma, Mingdi Li, Tong Hao, XiWei Zhang, Qian Chen, Yuanbin Zhao, Jing Niu, Haitao Zhu, Chengzhan Zhao, Jie Xia, Nan Li, Zhiqiang Dong, Qian Front Oncol Oncology Hepatoblastoma (HB) is the most common malignant tumor in the liver of infants and young children. The incidence rate varies among different populations. However, genetic differences in HB patients with different epidemiological and ancestral backgrounds have not been found. In this study, we aim to analyze data from 16 patients treated at our center and collected published data from whole-exome sequencing studies on HB, and to explore the genetic differences between races. Data from a total of 75 HB patients of three races (24 Asian, 37 Caucasian and 14 Hispanic) were analyzed. We identified 16 genes with recurrent somatic mutations and 7 core pathway modules. Among them, the Wnt/β-catenin pathway had the highest mutation rate, and the mutation frequency in Caucasians and Hispanics was approximately twice as high as that in Asians. In addition, this study compared the characteristics of gene mutations between patients who underwent preoperative chemotherapy and those who did not and found that there was no significant difference in gene mutations between the two groups. We also preliminarily verified the function of cancer-associated candidate genes (CTNNB1 and KMT2D). In conclusion, we found ethnic differences in HB biology at the genomic level, which expands our understanding of the genetics of HB in children. Frontiers Media S.A. 2021-04-21 /pmc/articles/PMC8096978/ /pubmed/33968779 http://dx.doi.org/10.3389/fonc.2021.669560 Text en Copyright © 2021 Liu, Gao, Wang, Jian, Ma, Li, Hao, Zhang, Chen, Zhao, Niu, Zhu, Zhao, Xia, Li and Dong https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Liu, Jie Gao, Chengwen Wang, Liping Jian, Xuemin Ma, Mingdi Li, Tong Hao, XiWei Zhang, Qian Chen, Yuanbin Zhao, Jing Niu, Haitao Zhu, Chengzhan Zhao, Jie Xia, Nan Li, Zhiqiang Dong, Qian Trans-Ancestry Mutation Landscape of Hepatoblastoma Genomes in Children |
title | Trans-Ancestry Mutation Landscape of Hepatoblastoma Genomes in Children |
title_full | Trans-Ancestry Mutation Landscape of Hepatoblastoma Genomes in Children |
title_fullStr | Trans-Ancestry Mutation Landscape of Hepatoblastoma Genomes in Children |
title_full_unstemmed | Trans-Ancestry Mutation Landscape of Hepatoblastoma Genomes in Children |
title_short | Trans-Ancestry Mutation Landscape of Hepatoblastoma Genomes in Children |
title_sort | trans-ancestry mutation landscape of hepatoblastoma genomes in children |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8096978/ https://www.ncbi.nlm.nih.gov/pubmed/33968779 http://dx.doi.org/10.3389/fonc.2021.669560 |
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