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Maintenance of Adaptive Dynamics and No Detectable Load in a Range-Edge Outcrossing Plant Population
During range expansion, edge populations are expected to face increased genetic drift, which in turn can alter and potentially compromise adaptive dynamics, preventing the removal of deleterious mutations and slowing down adaptation. Here, we contrast populations of the European subspecies Arabidops...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8097302/ https://www.ncbi.nlm.nih.gov/pubmed/33480994 http://dx.doi.org/10.1093/molbev/msaa322 |
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author | Takou, Margarita Hämälä, Tuomas Koch, Evan M Steige, Kim A Dittberner, Hannes Yant, Levi Genete, Mathieu Sunyaev, Shamil Castric, Vincent Vekemans, Xavier Savolainen, Outi de Meaux, Juliette |
author_facet | Takou, Margarita Hämälä, Tuomas Koch, Evan M Steige, Kim A Dittberner, Hannes Yant, Levi Genete, Mathieu Sunyaev, Shamil Castric, Vincent Vekemans, Xavier Savolainen, Outi de Meaux, Juliette |
author_sort | Takou, Margarita |
collection | PubMed |
description | During range expansion, edge populations are expected to face increased genetic drift, which in turn can alter and potentially compromise adaptive dynamics, preventing the removal of deleterious mutations and slowing down adaptation. Here, we contrast populations of the European subspecies Arabidopsis lyrata ssp. petraea, which expanded its Northern range after the last glaciation. We document a sharp decline in effective population size in the range-edge population and observe that nonsynonymous variants segregate at higher frequencies. We detect a 4.9% excess of derived nonsynonymous variants per individual in the range-edge population, suggesting an increase of the genomic burden of deleterious mutations. Inference of the fitness effects of mutations and modeling of allele frequencies under the explicit demographic history of each population predicts a depletion of rare deleterious variants in the range-edge population, but an enrichment for fixed ones, consistent with the bottleneck effect. However, the demographic history of the range-edge population predicts a small net decrease in per-individual fitness. Consistent with this prediction, the range-edge population is not impaired in its growth and survival measured in a common garden experiment. We further observe that the allelic diversity at the self-incompatibility locus, which ensures strict outcrossing and evolves under negative frequency-dependent selection, has remained unchanged. Genomic footprints indicative of selective sweeps are broader in the Northern population but not less frequent. We conclude that the outcrossing species A. lyrata ssp. petraea shows a strong resilience to the effect of range expansion. |
format | Online Article Text |
id | pubmed-8097302 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-80973022021-05-10 Maintenance of Adaptive Dynamics and No Detectable Load in a Range-Edge Outcrossing Plant Population Takou, Margarita Hämälä, Tuomas Koch, Evan M Steige, Kim A Dittberner, Hannes Yant, Levi Genete, Mathieu Sunyaev, Shamil Castric, Vincent Vekemans, Xavier Savolainen, Outi de Meaux, Juliette Mol Biol Evol Discoveries During range expansion, edge populations are expected to face increased genetic drift, which in turn can alter and potentially compromise adaptive dynamics, preventing the removal of deleterious mutations and slowing down adaptation. Here, we contrast populations of the European subspecies Arabidopsis lyrata ssp. petraea, which expanded its Northern range after the last glaciation. We document a sharp decline in effective population size in the range-edge population and observe that nonsynonymous variants segregate at higher frequencies. We detect a 4.9% excess of derived nonsynonymous variants per individual in the range-edge population, suggesting an increase of the genomic burden of deleterious mutations. Inference of the fitness effects of mutations and modeling of allele frequencies under the explicit demographic history of each population predicts a depletion of rare deleterious variants in the range-edge population, but an enrichment for fixed ones, consistent with the bottleneck effect. However, the demographic history of the range-edge population predicts a small net decrease in per-individual fitness. Consistent with this prediction, the range-edge population is not impaired in its growth and survival measured in a common garden experiment. We further observe that the allelic diversity at the self-incompatibility locus, which ensures strict outcrossing and evolves under negative frequency-dependent selection, has remained unchanged. Genomic footprints indicative of selective sweeps are broader in the Northern population but not less frequent. We conclude that the outcrossing species A. lyrata ssp. petraea shows a strong resilience to the effect of range expansion. Oxford University Press 2021-01-22 /pmc/articles/PMC8097302/ /pubmed/33480994 http://dx.doi.org/10.1093/molbev/msaa322 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Discoveries Takou, Margarita Hämälä, Tuomas Koch, Evan M Steige, Kim A Dittberner, Hannes Yant, Levi Genete, Mathieu Sunyaev, Shamil Castric, Vincent Vekemans, Xavier Savolainen, Outi de Meaux, Juliette Maintenance of Adaptive Dynamics and No Detectable Load in a Range-Edge Outcrossing Plant Population |
title | Maintenance of Adaptive Dynamics and No Detectable Load in a Range-Edge Outcrossing Plant Population |
title_full | Maintenance of Adaptive Dynamics and No Detectable Load in a Range-Edge Outcrossing Plant Population |
title_fullStr | Maintenance of Adaptive Dynamics and No Detectable Load in a Range-Edge Outcrossing Plant Population |
title_full_unstemmed | Maintenance of Adaptive Dynamics and No Detectable Load in a Range-Edge Outcrossing Plant Population |
title_short | Maintenance of Adaptive Dynamics and No Detectable Load in a Range-Edge Outcrossing Plant Population |
title_sort | maintenance of adaptive dynamics and no detectable load in a range-edge outcrossing plant population |
topic | Discoveries |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8097302/ https://www.ncbi.nlm.nih.gov/pubmed/33480994 http://dx.doi.org/10.1093/molbev/msaa322 |
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