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Potential role of m6A RNA methylation regulators in osteosarcoma and its clinical prognostic value
BACKGROUND: Osteosarcoma is a disease with high mortality in children and adolescents, and metastasis is one of the important clinical features of osteosarcoma. N6-Methyladenosine (m6A) is the most abundant methylation modification in mRNA, which is regulated by m6A regulators. It is reported that i...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8097785/ https://www.ncbi.nlm.nih.gov/pubmed/33952279 http://dx.doi.org/10.1186/s13018-021-02422-5 |
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author | Liu, Hua Qin, Guangzhen Ji, Yanan Wang, Xiaojian Bao, Hailin Guan, Xiaojun Wei, Aichun Cai, Zhigang |
author_facet | Liu, Hua Qin, Guangzhen Ji, Yanan Wang, Xiaojian Bao, Hailin Guan, Xiaojun Wei, Aichun Cai, Zhigang |
author_sort | Liu, Hua |
collection | PubMed |
description | BACKGROUND: Osteosarcoma is a disease with high mortality in children and adolescents, and metastasis is one of the important clinical features of osteosarcoma. N6-Methyladenosine (m6A) is the most abundant methylation modification in mRNA, which is regulated by m6A regulators. It is reported that it is related to the occurrence and development of tumors. However, the mechanism of its action in osteosarcoma is rarely known. The purpose of this study was to identify the potential role of m6A regulatory factor in osteosarcoma and its clinical prognostic value. METHODS: Here, we used The Cancer Genome Atlas (TCGA) to comprehensively analyze the relationship between m6A regulatory factors and osteosarcoma (metastasis group and non-metastasis group). We analyzed their survival relationship and analyzed all the m6A regulatory factors in TCGA tumor data set by using the univariate Cox proportional hazard regression model. Finally, we selected two survival-related methylation regulators (FTO and IGF2BP2) as risk gene signature. RESULTS: According to the median risk, patients were divided into low-risk group and high-risk group. Multivariate Cox regression analysis showed that these two risk genes were considered to be the key factors independently predicting the prognosis of patients with osteosarcoma. In addition, we verified their characteristics with gene expression omnibus (GEO) DataSets and confirmed that they are related to tumor and immune-related signaling pathways through gene set enrichment analysis (GESA) and immune infiltration analysis. CONCLUSIONS: In conclusion, m6A regulators might play an important role in the metastasis of osteosarcoma and have potential important value for the prognosis and treatment strategy of osteosarcoma patients. |
format | Online Article Text |
id | pubmed-8097785 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-80977852021-05-05 Potential role of m6A RNA methylation regulators in osteosarcoma and its clinical prognostic value Liu, Hua Qin, Guangzhen Ji, Yanan Wang, Xiaojian Bao, Hailin Guan, Xiaojun Wei, Aichun Cai, Zhigang J Orthop Surg Res Research Article BACKGROUND: Osteosarcoma is a disease with high mortality in children and adolescents, and metastasis is one of the important clinical features of osteosarcoma. N6-Methyladenosine (m6A) is the most abundant methylation modification in mRNA, which is regulated by m6A regulators. It is reported that it is related to the occurrence and development of tumors. However, the mechanism of its action in osteosarcoma is rarely known. The purpose of this study was to identify the potential role of m6A regulatory factor in osteosarcoma and its clinical prognostic value. METHODS: Here, we used The Cancer Genome Atlas (TCGA) to comprehensively analyze the relationship between m6A regulatory factors and osteosarcoma (metastasis group and non-metastasis group). We analyzed their survival relationship and analyzed all the m6A regulatory factors in TCGA tumor data set by using the univariate Cox proportional hazard regression model. Finally, we selected two survival-related methylation regulators (FTO and IGF2BP2) as risk gene signature. RESULTS: According to the median risk, patients were divided into low-risk group and high-risk group. Multivariate Cox regression analysis showed that these two risk genes were considered to be the key factors independently predicting the prognosis of patients with osteosarcoma. In addition, we verified their characteristics with gene expression omnibus (GEO) DataSets and confirmed that they are related to tumor and immune-related signaling pathways through gene set enrichment analysis (GESA) and immune infiltration analysis. CONCLUSIONS: In conclusion, m6A regulators might play an important role in the metastasis of osteosarcoma and have potential important value for the prognosis and treatment strategy of osteosarcoma patients. BioMed Central 2021-05-05 /pmc/articles/PMC8097785/ /pubmed/33952279 http://dx.doi.org/10.1186/s13018-021-02422-5 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Liu, Hua Qin, Guangzhen Ji, Yanan Wang, Xiaojian Bao, Hailin Guan, Xiaojun Wei, Aichun Cai, Zhigang Potential role of m6A RNA methylation regulators in osteosarcoma and its clinical prognostic value |
title | Potential role of m6A RNA methylation regulators in osteosarcoma and its clinical prognostic value |
title_full | Potential role of m6A RNA methylation regulators in osteosarcoma and its clinical prognostic value |
title_fullStr | Potential role of m6A RNA methylation regulators in osteosarcoma and its clinical prognostic value |
title_full_unstemmed | Potential role of m6A RNA methylation regulators in osteosarcoma and its clinical prognostic value |
title_short | Potential role of m6A RNA methylation regulators in osteosarcoma and its clinical prognostic value |
title_sort | potential role of m6a rna methylation regulators in osteosarcoma and its clinical prognostic value |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8097785/ https://www.ncbi.nlm.nih.gov/pubmed/33952279 http://dx.doi.org/10.1186/s13018-021-02422-5 |
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