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Network model‐based screen for FDA‐approved drugs affecting cardiac fibrosis

Cardiac fibrosis is a significant component of pathological heart remodeling, yet it is not directly targeted by existing drugs. Systems pharmacology approaches have the potential to provide mechanistic frameworks with which to predict and understand how drugs modulate biological systems. Here, we c...

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Autores principales: Zeigler, Angela C., Chandrabhatla, Anirudha S., Christiansen, Steven L., Nelson, Anders R., Holmes, Jeffrey W., Saucerman, Jeffrey J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8099443/
https://www.ncbi.nlm.nih.gov/pubmed/33571402
http://dx.doi.org/10.1002/psp4.12599
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author Zeigler, Angela C.
Chandrabhatla, Anirudha S.
Christiansen, Steven L.
Nelson, Anders R.
Holmes, Jeffrey W.
Saucerman, Jeffrey J.
author_facet Zeigler, Angela C.
Chandrabhatla, Anirudha S.
Christiansen, Steven L.
Nelson, Anders R.
Holmes, Jeffrey W.
Saucerman, Jeffrey J.
author_sort Zeigler, Angela C.
collection PubMed
description Cardiac fibrosis is a significant component of pathological heart remodeling, yet it is not directly targeted by existing drugs. Systems pharmacology approaches have the potential to provide mechanistic frameworks with which to predict and understand how drugs modulate biological systems. Here, we combine network modeling of the fibroblast signaling network with 36 unique drug‐target interactions from DrugBank to predict drugs that modulate fibroblast phenotype and fibrosis. Galunisertib was predicted to decrease collagen and α‐SMA expression, which we validated in human cardiac fibroblasts. In vivo fibrosis data from the literature validated predictions for 10 drugs. Further, the model was used to identify network mechanisms by which these drugs work. Arsenic trioxide was predicted to induce fibrosis by AP1‐driven TGFβ expression and MMP2‐driven TGFβ activation. Entresto (valsartan/sacubitril) was predicted to suppress fibrosis by valsartan suppression of ERK signaling and sacubitril enhancement of PKG activity, both of which decreased Smad3 activity. Overall, this study provides a framework for integrating drug‐target mechanisms with logic‐based network models, which can drive further studies both in cardiac fibrosis and other conditions.
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spelling pubmed-80994432021-05-10 Network model‐based screen for FDA‐approved drugs affecting cardiac fibrosis Zeigler, Angela C. Chandrabhatla, Anirudha S. Christiansen, Steven L. Nelson, Anders R. Holmes, Jeffrey W. Saucerman, Jeffrey J. CPT Pharmacometrics Syst Pharmacol Research Cardiac fibrosis is a significant component of pathological heart remodeling, yet it is not directly targeted by existing drugs. Systems pharmacology approaches have the potential to provide mechanistic frameworks with which to predict and understand how drugs modulate biological systems. Here, we combine network modeling of the fibroblast signaling network with 36 unique drug‐target interactions from DrugBank to predict drugs that modulate fibroblast phenotype and fibrosis. Galunisertib was predicted to decrease collagen and α‐SMA expression, which we validated in human cardiac fibroblasts. In vivo fibrosis data from the literature validated predictions for 10 drugs. Further, the model was used to identify network mechanisms by which these drugs work. Arsenic trioxide was predicted to induce fibrosis by AP1‐driven TGFβ expression and MMP2‐driven TGFβ activation. Entresto (valsartan/sacubitril) was predicted to suppress fibrosis by valsartan suppression of ERK signaling and sacubitril enhancement of PKG activity, both of which decreased Smad3 activity. Overall, this study provides a framework for integrating drug‐target mechanisms with logic‐based network models, which can drive further studies both in cardiac fibrosis and other conditions. John Wiley and Sons Inc. 2021-02-27 2021-04 /pmc/articles/PMC8099443/ /pubmed/33571402 http://dx.doi.org/10.1002/psp4.12599 Text en © 2021 The Authors. CPT: Pharmacometrics & Systems Pharmacology published by Wiley Periodicals LLC on behalf of American Society for Clinical Pharmacology and Therapeutics. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Research
Zeigler, Angela C.
Chandrabhatla, Anirudha S.
Christiansen, Steven L.
Nelson, Anders R.
Holmes, Jeffrey W.
Saucerman, Jeffrey J.
Network model‐based screen for FDA‐approved drugs affecting cardiac fibrosis
title Network model‐based screen for FDA‐approved drugs affecting cardiac fibrosis
title_full Network model‐based screen for FDA‐approved drugs affecting cardiac fibrosis
title_fullStr Network model‐based screen for FDA‐approved drugs affecting cardiac fibrosis
title_full_unstemmed Network model‐based screen for FDA‐approved drugs affecting cardiac fibrosis
title_short Network model‐based screen for FDA‐approved drugs affecting cardiac fibrosis
title_sort network model‐based screen for fda‐approved drugs affecting cardiac fibrosis
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8099443/
https://www.ncbi.nlm.nih.gov/pubmed/33571402
http://dx.doi.org/10.1002/psp4.12599
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