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Network model‐based screen for FDA‐approved drugs affecting cardiac fibrosis
Cardiac fibrosis is a significant component of pathological heart remodeling, yet it is not directly targeted by existing drugs. Systems pharmacology approaches have the potential to provide mechanistic frameworks with which to predict and understand how drugs modulate biological systems. Here, we c...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8099443/ https://www.ncbi.nlm.nih.gov/pubmed/33571402 http://dx.doi.org/10.1002/psp4.12599 |
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author | Zeigler, Angela C. Chandrabhatla, Anirudha S. Christiansen, Steven L. Nelson, Anders R. Holmes, Jeffrey W. Saucerman, Jeffrey J. |
author_facet | Zeigler, Angela C. Chandrabhatla, Anirudha S. Christiansen, Steven L. Nelson, Anders R. Holmes, Jeffrey W. Saucerman, Jeffrey J. |
author_sort | Zeigler, Angela C. |
collection | PubMed |
description | Cardiac fibrosis is a significant component of pathological heart remodeling, yet it is not directly targeted by existing drugs. Systems pharmacology approaches have the potential to provide mechanistic frameworks with which to predict and understand how drugs modulate biological systems. Here, we combine network modeling of the fibroblast signaling network with 36 unique drug‐target interactions from DrugBank to predict drugs that modulate fibroblast phenotype and fibrosis. Galunisertib was predicted to decrease collagen and α‐SMA expression, which we validated in human cardiac fibroblasts. In vivo fibrosis data from the literature validated predictions for 10 drugs. Further, the model was used to identify network mechanisms by which these drugs work. Arsenic trioxide was predicted to induce fibrosis by AP1‐driven TGFβ expression and MMP2‐driven TGFβ activation. Entresto (valsartan/sacubitril) was predicted to suppress fibrosis by valsartan suppression of ERK signaling and sacubitril enhancement of PKG activity, both of which decreased Smad3 activity. Overall, this study provides a framework for integrating drug‐target mechanisms with logic‐based network models, which can drive further studies both in cardiac fibrosis and other conditions. |
format | Online Article Text |
id | pubmed-8099443 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-80994432021-05-10 Network model‐based screen for FDA‐approved drugs affecting cardiac fibrosis Zeigler, Angela C. Chandrabhatla, Anirudha S. Christiansen, Steven L. Nelson, Anders R. Holmes, Jeffrey W. Saucerman, Jeffrey J. CPT Pharmacometrics Syst Pharmacol Research Cardiac fibrosis is a significant component of pathological heart remodeling, yet it is not directly targeted by existing drugs. Systems pharmacology approaches have the potential to provide mechanistic frameworks with which to predict and understand how drugs modulate biological systems. Here, we combine network modeling of the fibroblast signaling network with 36 unique drug‐target interactions from DrugBank to predict drugs that modulate fibroblast phenotype and fibrosis. Galunisertib was predicted to decrease collagen and α‐SMA expression, which we validated in human cardiac fibroblasts. In vivo fibrosis data from the literature validated predictions for 10 drugs. Further, the model was used to identify network mechanisms by which these drugs work. Arsenic trioxide was predicted to induce fibrosis by AP1‐driven TGFβ expression and MMP2‐driven TGFβ activation. Entresto (valsartan/sacubitril) was predicted to suppress fibrosis by valsartan suppression of ERK signaling and sacubitril enhancement of PKG activity, both of which decreased Smad3 activity. Overall, this study provides a framework for integrating drug‐target mechanisms with logic‐based network models, which can drive further studies both in cardiac fibrosis and other conditions. John Wiley and Sons Inc. 2021-02-27 2021-04 /pmc/articles/PMC8099443/ /pubmed/33571402 http://dx.doi.org/10.1002/psp4.12599 Text en © 2021 The Authors. CPT: Pharmacometrics & Systems Pharmacology published by Wiley Periodicals LLC on behalf of American Society for Clinical Pharmacology and Therapeutics. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Research Zeigler, Angela C. Chandrabhatla, Anirudha S. Christiansen, Steven L. Nelson, Anders R. Holmes, Jeffrey W. Saucerman, Jeffrey J. Network model‐based screen for FDA‐approved drugs affecting cardiac fibrosis |
title | Network model‐based screen for FDA‐approved drugs affecting cardiac fibrosis |
title_full | Network model‐based screen for FDA‐approved drugs affecting cardiac fibrosis |
title_fullStr | Network model‐based screen for FDA‐approved drugs affecting cardiac fibrosis |
title_full_unstemmed | Network model‐based screen for FDA‐approved drugs affecting cardiac fibrosis |
title_short | Network model‐based screen for FDA‐approved drugs affecting cardiac fibrosis |
title_sort | network model‐based screen for fda‐approved drugs affecting cardiac fibrosis |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8099443/ https://www.ncbi.nlm.nih.gov/pubmed/33571402 http://dx.doi.org/10.1002/psp4.12599 |
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