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Periphery-aware COVID-19 diagnosis with contrastive representation enhancement

Computer-aided diagnosis has been extensively investigated for more rapid and accurate screening during the outbreak of COVID-19 epidemic. However, the challenge remains to distinguish COVID-19 in the complex scenario of multi-type pneumonia classification and improve the overall diagnostic performa...

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Autores principales: Hou, Junlin, Xu, Jilan, Jiang, Longquan, Du, Shanshan, Feng, Rui, Zhang, Yuejie, Shan, Fei, Xue, Xiangyang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8099585/
https://www.ncbi.nlm.nih.gov/pubmed/33972808
http://dx.doi.org/10.1016/j.patcog.2021.108005
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author Hou, Junlin
Xu, Jilan
Jiang, Longquan
Du, Shanshan
Feng, Rui
Zhang, Yuejie
Shan, Fei
Xue, Xiangyang
author_facet Hou, Junlin
Xu, Jilan
Jiang, Longquan
Du, Shanshan
Feng, Rui
Zhang, Yuejie
Shan, Fei
Xue, Xiangyang
author_sort Hou, Junlin
collection PubMed
description Computer-aided diagnosis has been extensively investigated for more rapid and accurate screening during the outbreak of COVID-19 epidemic. However, the challenge remains to distinguish COVID-19 in the complex scenario of multi-type pneumonia classification and improve the overall diagnostic performance. In this paper, we propose a novel periphery-aware COVID-19 diagnosis approach with contrastive representation enhancement to identify COVID-19 from influenza-A (H1N1) viral pneumonia, community acquired pneumonia (CAP), and healthy subjects using chest CT images. Our key contributions include: 1) an unsupervised Periphery-aware Spatial Prediction (PSP) task which is designed to introduce important spatial patterns into deep networks; 2) an adaptive Contrastive Representation Enhancement (CRE) mechanism which can effectively capture the intra-class similarity and inter-class difference of various types of pneumonia. We integrate PSP and CRE to obtain the representations which are highly discriminative in COVID-19 screening. We evaluate our approach comprehensively on our constructed large-scale dataset and two public datasets. Extensive experiments on both volume-level and slice-level CT images demonstrate the effectiveness of our proposed approach with PSP and CRE for COVID-19 diagnosis.
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spelling pubmed-80995852021-05-06 Periphery-aware COVID-19 diagnosis with contrastive representation enhancement Hou, Junlin Xu, Jilan Jiang, Longquan Du, Shanshan Feng, Rui Zhang, Yuejie Shan, Fei Xue, Xiangyang Pattern Recognit Article Computer-aided diagnosis has been extensively investigated for more rapid and accurate screening during the outbreak of COVID-19 epidemic. However, the challenge remains to distinguish COVID-19 in the complex scenario of multi-type pneumonia classification and improve the overall diagnostic performance. In this paper, we propose a novel periphery-aware COVID-19 diagnosis approach with contrastive representation enhancement to identify COVID-19 from influenza-A (H1N1) viral pneumonia, community acquired pneumonia (CAP), and healthy subjects using chest CT images. Our key contributions include: 1) an unsupervised Periphery-aware Spatial Prediction (PSP) task which is designed to introduce important spatial patterns into deep networks; 2) an adaptive Contrastive Representation Enhancement (CRE) mechanism which can effectively capture the intra-class similarity and inter-class difference of various types of pneumonia. We integrate PSP and CRE to obtain the representations which are highly discriminative in COVID-19 screening. We evaluate our approach comprehensively on our constructed large-scale dataset and two public datasets. Extensive experiments on both volume-level and slice-level CT images demonstrate the effectiveness of our proposed approach with PSP and CRE for COVID-19 diagnosis. Elsevier Ltd. 2021-10 2021-05-06 /pmc/articles/PMC8099585/ /pubmed/33972808 http://dx.doi.org/10.1016/j.patcog.2021.108005 Text en © 2021 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Hou, Junlin
Xu, Jilan
Jiang, Longquan
Du, Shanshan
Feng, Rui
Zhang, Yuejie
Shan, Fei
Xue, Xiangyang
Periphery-aware COVID-19 diagnosis with contrastive representation enhancement
title Periphery-aware COVID-19 diagnosis with contrastive representation enhancement
title_full Periphery-aware COVID-19 diagnosis with contrastive representation enhancement
title_fullStr Periphery-aware COVID-19 diagnosis with contrastive representation enhancement
title_full_unstemmed Periphery-aware COVID-19 diagnosis with contrastive representation enhancement
title_short Periphery-aware COVID-19 diagnosis with contrastive representation enhancement
title_sort periphery-aware covid-19 diagnosis with contrastive representation enhancement
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8099585/
https://www.ncbi.nlm.nih.gov/pubmed/33972808
http://dx.doi.org/10.1016/j.patcog.2021.108005
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