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The crystal structures of three disordered 2-substituted benzimidazole esters

The crystal structures of three benzimidazole esters containing aryl or heterocyclic substituents at position 2 are reported, and all three exhibit disorder of mol­ecular entities. In ethyl 1-methyl-2-[4-(prop-2-yn­oxy)phen­yl]-1H-benzimidazole-5-carboxyl­ate, C(20)H(18)N(2)O(3), (I), the prop-2-yn-...

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Autores principales: Harish Chinthal, Chayanna, Yathirajan, Hemmige S., Manju, Nagaraja, Kalluraya, Balakrishna, Foro, Sabine, Glidewell, Christopher
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8100276/
https://www.ncbi.nlm.nih.gov/pubmed/34026249
http://dx.doi.org/10.1107/S2056989021003364
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author Harish Chinthal, Chayanna
Yathirajan, Hemmige S.
Manju, Nagaraja
Kalluraya, Balakrishna
Foro, Sabine
Glidewell, Christopher
author_facet Harish Chinthal, Chayanna
Yathirajan, Hemmige S.
Manju, Nagaraja
Kalluraya, Balakrishna
Foro, Sabine
Glidewell, Christopher
author_sort Harish Chinthal, Chayanna
collection PubMed
description The crystal structures of three benzimidazole esters containing aryl or heterocyclic substituents at position 2 are reported, and all three exhibit disorder of mol­ecular entities. In ethyl 1-methyl-2-[4-(prop-2-yn­oxy)phen­yl]-1H-benzimidazole-5-carboxyl­ate, C(20)H(18)N(2)O(3), (I), the prop-2-yn-1-oxyphenyl unit is disordered over two sets of atomic sites having effectively equal occupancies, 0.506 (5) and 0.494 (5). The propyl substituent in ethyl 1-propyl-2-(pyren-1-yl)-1H-benzimidazole-5-carboxyl­ate, C(29)H(24)N(2)O(2), (II), is disordered over two sets of atomic sites having occupancies 0.601 (8) and 0.399 (8), and the ester unit in ethyl 1-methyl-2-(5-chloro-3-methyl-1-phenyl-1H-pyrazol-4-yl)-1H-benzimidazole-5-carboxyl­ate, C(21)H(19)ClN(4)O(2) (III), is disordered over two sets of atomic sites having occupancies 0.645 (7) and 0.355 (7). In each of the C—H⋯π(arene) hydrogen bonds in (I), the donor and acceptor form parts of different disorder components, so that no continuous aggregation is possible. The mol­ecules of (II) are linked by a single C—H⋯O hydrogen bond into C(10) chains, which are linked into sheets by a π–π stacking inter­action, whereas those of (III) are just linked into C(13) chains, again by a single C—H⋯O hydrogen bond. Comparisons are made with the structures of some related compounds.
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spelling pubmed-81002762021-05-21 The crystal structures of three disordered 2-substituted benzimidazole esters Harish Chinthal, Chayanna Yathirajan, Hemmige S. Manju, Nagaraja Kalluraya, Balakrishna Foro, Sabine Glidewell, Christopher Acta Crystallogr E Crystallogr Commun Research Communications The crystal structures of three benzimidazole esters containing aryl or heterocyclic substituents at position 2 are reported, and all three exhibit disorder of mol­ecular entities. In ethyl 1-methyl-2-[4-(prop-2-yn­oxy)phen­yl]-1H-benzimidazole-5-carboxyl­ate, C(20)H(18)N(2)O(3), (I), the prop-2-yn-1-oxyphenyl unit is disordered over two sets of atomic sites having effectively equal occupancies, 0.506 (5) and 0.494 (5). The propyl substituent in ethyl 1-propyl-2-(pyren-1-yl)-1H-benzimidazole-5-carboxyl­ate, C(29)H(24)N(2)O(2), (II), is disordered over two sets of atomic sites having occupancies 0.601 (8) and 0.399 (8), and the ester unit in ethyl 1-methyl-2-(5-chloro-3-methyl-1-phenyl-1H-pyrazol-4-yl)-1H-benzimidazole-5-carboxyl­ate, C(21)H(19)ClN(4)O(2) (III), is disordered over two sets of atomic sites having occupancies 0.645 (7) and 0.355 (7). In each of the C—H⋯π(arene) hydrogen bonds in (I), the donor and acceptor form parts of different disorder components, so that no continuous aggregation is possible. The mol­ecules of (II) are linked by a single C—H⋯O hydrogen bond into C(10) chains, which are linked into sheets by a π–π stacking inter­action, whereas those of (III) are just linked into C(13) chains, again by a single C—H⋯O hydrogen bond. Comparisons are made with the structures of some related compounds. International Union of Crystallography 2021-04-09 /pmc/articles/PMC8100276/ /pubmed/34026249 http://dx.doi.org/10.1107/S2056989021003364 Text en © Harish Chinthal et al. 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Communications
Harish Chinthal, Chayanna
Yathirajan, Hemmige S.
Manju, Nagaraja
Kalluraya, Balakrishna
Foro, Sabine
Glidewell, Christopher
The crystal structures of three disordered 2-substituted benzimidazole esters
title The crystal structures of three disordered 2-substituted benzimidazole esters
title_full The crystal structures of three disordered 2-substituted benzimidazole esters
title_fullStr The crystal structures of three disordered 2-substituted benzimidazole esters
title_full_unstemmed The crystal structures of three disordered 2-substituted benzimidazole esters
title_short The crystal structures of three disordered 2-substituted benzimidazole esters
title_sort crystal structures of three disordered 2-substituted benzimidazole esters
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8100276/
https://www.ncbi.nlm.nih.gov/pubmed/34026249
http://dx.doi.org/10.1107/S2056989021003364
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