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SuperPlotsOfData—a web app for the transparent display and quantitative comparison of continuous data from different conditions
Plots and charts are graphical tools that make data intelligible and digestible by humans. But the oversimplification of data by only plotting the statistical summaries conflicts with the transparent communication of results. Therefore, plotting of all data are generally encouraged and this can be a...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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The American Society for Cell Biology
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8101441/ https://www.ncbi.nlm.nih.gov/pubmed/33476183 http://dx.doi.org/10.1091/mbc.E20-09-0583 |
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author | Goedhart, Joachim |
author_facet | Goedhart, Joachim |
author_sort | Goedhart, Joachim |
collection | PubMed |
description | Plots and charts are graphical tools that make data intelligible and digestible by humans. But the oversimplification of data by only plotting the statistical summaries conflicts with the transparent communication of results. Therefore, plotting of all data are generally encouraged and this can be achieved by using a dotplot for discrete conditions. Dotplots, however, often fail to communicate whether the data are from different technical or biological replicates. The superplot has been proposed by Lord and colleagues (Lord et al., 2020) to improve the communication of experimental design and results. To simplify the plotting of data from discrete conditions as a superplot, the SuperPlotsOfData web app was generated. The tool offers easy and open access to state-of-the-art data visualization. In addition, it incorporates recent innovations in data visualization and analysis, including raincloud plots and estimation statistics. The free, open source webtool can be accessed at: https://huygens.science.uva.nl/SuperPlotsOfData/. |
format | Online Article Text |
id | pubmed-8101441 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The American Society for Cell Biology |
record_format | MEDLINE/PubMed |
spelling | pubmed-81014412021-05-30 SuperPlotsOfData—a web app for the transparent display and quantitative comparison of continuous data from different conditions Goedhart, Joachim Mol Biol Cell Brief Report Plots and charts are graphical tools that make data intelligible and digestible by humans. But the oversimplification of data by only plotting the statistical summaries conflicts with the transparent communication of results. Therefore, plotting of all data are generally encouraged and this can be achieved by using a dotplot for discrete conditions. Dotplots, however, often fail to communicate whether the data are from different technical or biological replicates. The superplot has been proposed by Lord and colleagues (Lord et al., 2020) to improve the communication of experimental design and results. To simplify the plotting of data from discrete conditions as a superplot, the SuperPlotsOfData web app was generated. The tool offers easy and open access to state-of-the-art data visualization. In addition, it incorporates recent innovations in data visualization and analysis, including raincloud plots and estimation statistics. The free, open source webtool can be accessed at: https://huygens.science.uva.nl/SuperPlotsOfData/. The American Society for Cell Biology 2021-03-15 /pmc/articles/PMC8101441/ /pubmed/33476183 http://dx.doi.org/10.1091/mbc.E20-09-0583 Text en © 2021 Goedhart. “ASCB®,” “The American Society for Cell Biology®,” and “Molecular Biology of the Cell®” are registered trademarks of The American Society for Cell Biology. https://creativecommons.org/licenses/by-nc-sa/3.0/This article is distributed by The American Society for Cell Biology under license from the author(s). Two months after publication it is available to the public under an Attribution–Noncommercial–Share Alike 3.0 Unported Creative Commons License. |
spellingShingle | Brief Report Goedhart, Joachim SuperPlotsOfData—a web app for the transparent display and quantitative comparison of continuous data from different conditions |
title | SuperPlotsOfData—a web app for the transparent display and quantitative comparison of continuous data from different conditions |
title_full | SuperPlotsOfData—a web app for the transparent display and quantitative comparison of continuous data from different conditions |
title_fullStr | SuperPlotsOfData—a web app for the transparent display and quantitative comparison of continuous data from different conditions |
title_full_unstemmed | SuperPlotsOfData—a web app for the transparent display and quantitative comparison of continuous data from different conditions |
title_short | SuperPlotsOfData—a web app for the transparent display and quantitative comparison of continuous data from different conditions |
title_sort | superplotsofdata—a web app for the transparent display and quantitative comparison of continuous data from different conditions |
topic | Brief Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8101441/ https://www.ncbi.nlm.nih.gov/pubmed/33476183 http://dx.doi.org/10.1091/mbc.E20-09-0583 |
work_keys_str_mv | AT goedhartjoachim superplotsofdataawebappforthetransparentdisplayandquantitativecomparisonofcontinuousdatafromdifferentconditions |