Cargando…
Combined Analysis of Volatile Terpenoid Metabolism and Transcriptome Reveals Transcription Factors Related to Terpene Synthase in Two Cultivars of Dendrobium officinale Flowers
Dendrobium officinale is a kind of traditional Chinese herbal medicine. Its flowers could be used as health care tea for its aroma flavor and medicinal value. Most recent studies demonstrated that terpenoids are the main components of the aromatic compounds in the flowers, but the biosynthesis of te...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8101708/ https://www.ncbi.nlm.nih.gov/pubmed/33968137 http://dx.doi.org/10.3389/fgene.2021.661296 |
_version_ | 1783688998361759744 |
---|---|
author | Li, Ninghong Dong, Yingxue Lv, Min Qian, Li Sun, Xu Liu, Lin Cai, Yongping Fan, Honghong |
author_facet | Li, Ninghong Dong, Yingxue Lv, Min Qian, Li Sun, Xu Liu, Lin Cai, Yongping Fan, Honghong |
author_sort | Li, Ninghong |
collection | PubMed |
description | Dendrobium officinale is a kind of traditional Chinese herbal medicine. Its flowers could be used as health care tea for its aroma flavor and medicinal value. Most recent studies demonstrated that terpenoids are the main components of the aromatic compounds in the flowers, but the biosynthesis of terpenoids is poorly understood in D. officinale. In the experiment, the flowers from two cultivars of D. officinale with different smells were collected. The transcriptome analysis and combined volatile terpenoids determination were performed to identify the genes related to the biosynthesis of the terpenoids. The results showed that the different products of volatile terpenoids are α-thujene, linalool, α-terpineol, α-phellandrene, γ-muurolene, α-patchoulene, and δ-elemene in two cultivar flowers. The transcriptome analysis detected 25,484 genes in the flowers. And 18,650 differentially expressed genes were identified between the two cultivars. Of these genes, 253 genes were mapped to the terpenoid metabolism pathway. Among these genes, 13 terpene synthase (TPS) genes may have correlations with AP2/ERF, WRKY, MYB, bHLH, and bZIP transcription factors by weighted gene co-expression network analysis (WGCNA). The transcription factors have regulatory effects on TPS genes. These results may provide ideas for the terpenoid biosynthesis and regulatory network of D. officinale flowers. |
format | Online Article Text |
id | pubmed-8101708 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-81017082021-05-07 Combined Analysis of Volatile Terpenoid Metabolism and Transcriptome Reveals Transcription Factors Related to Terpene Synthase in Two Cultivars of Dendrobium officinale Flowers Li, Ninghong Dong, Yingxue Lv, Min Qian, Li Sun, Xu Liu, Lin Cai, Yongping Fan, Honghong Front Genet Genetics Dendrobium officinale is a kind of traditional Chinese herbal medicine. Its flowers could be used as health care tea for its aroma flavor and medicinal value. Most recent studies demonstrated that terpenoids are the main components of the aromatic compounds in the flowers, but the biosynthesis of terpenoids is poorly understood in D. officinale. In the experiment, the flowers from two cultivars of D. officinale with different smells were collected. The transcriptome analysis and combined volatile terpenoids determination were performed to identify the genes related to the biosynthesis of the terpenoids. The results showed that the different products of volatile terpenoids are α-thujene, linalool, α-terpineol, α-phellandrene, γ-muurolene, α-patchoulene, and δ-elemene in two cultivar flowers. The transcriptome analysis detected 25,484 genes in the flowers. And 18,650 differentially expressed genes were identified between the two cultivars. Of these genes, 253 genes were mapped to the terpenoid metabolism pathway. Among these genes, 13 terpene synthase (TPS) genes may have correlations with AP2/ERF, WRKY, MYB, bHLH, and bZIP transcription factors by weighted gene co-expression network analysis (WGCNA). The transcription factors have regulatory effects on TPS genes. These results may provide ideas for the terpenoid biosynthesis and regulatory network of D. officinale flowers. Frontiers Media S.A. 2021-04-22 /pmc/articles/PMC8101708/ /pubmed/33968137 http://dx.doi.org/10.3389/fgene.2021.661296 Text en Copyright © 2021 Li, Dong, Lv, Qian, Sun, Liu, Cai and Fan. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Li, Ninghong Dong, Yingxue Lv, Min Qian, Li Sun, Xu Liu, Lin Cai, Yongping Fan, Honghong Combined Analysis of Volatile Terpenoid Metabolism and Transcriptome Reveals Transcription Factors Related to Terpene Synthase in Two Cultivars of Dendrobium officinale Flowers |
title | Combined Analysis of Volatile Terpenoid Metabolism and Transcriptome Reveals Transcription Factors Related to Terpene Synthase in Two Cultivars of Dendrobium officinale Flowers |
title_full | Combined Analysis of Volatile Terpenoid Metabolism and Transcriptome Reveals Transcription Factors Related to Terpene Synthase in Two Cultivars of Dendrobium officinale Flowers |
title_fullStr | Combined Analysis of Volatile Terpenoid Metabolism and Transcriptome Reveals Transcription Factors Related to Terpene Synthase in Two Cultivars of Dendrobium officinale Flowers |
title_full_unstemmed | Combined Analysis of Volatile Terpenoid Metabolism and Transcriptome Reveals Transcription Factors Related to Terpene Synthase in Two Cultivars of Dendrobium officinale Flowers |
title_short | Combined Analysis of Volatile Terpenoid Metabolism and Transcriptome Reveals Transcription Factors Related to Terpene Synthase in Two Cultivars of Dendrobium officinale Flowers |
title_sort | combined analysis of volatile terpenoid metabolism and transcriptome reveals transcription factors related to terpene synthase in two cultivars of dendrobium officinale flowers |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8101708/ https://www.ncbi.nlm.nih.gov/pubmed/33968137 http://dx.doi.org/10.3389/fgene.2021.661296 |
work_keys_str_mv | AT lininghong combinedanalysisofvolatileterpenoidmetabolismandtranscriptomerevealstranscriptionfactorsrelatedtoterpenesynthaseintwocultivarsofdendrobiumofficinaleflowers AT dongyingxue combinedanalysisofvolatileterpenoidmetabolismandtranscriptomerevealstranscriptionfactorsrelatedtoterpenesynthaseintwocultivarsofdendrobiumofficinaleflowers AT lvmin combinedanalysisofvolatileterpenoidmetabolismandtranscriptomerevealstranscriptionfactorsrelatedtoterpenesynthaseintwocultivarsofdendrobiumofficinaleflowers AT qianli combinedanalysisofvolatileterpenoidmetabolismandtranscriptomerevealstranscriptionfactorsrelatedtoterpenesynthaseintwocultivarsofdendrobiumofficinaleflowers AT sunxu combinedanalysisofvolatileterpenoidmetabolismandtranscriptomerevealstranscriptionfactorsrelatedtoterpenesynthaseintwocultivarsofdendrobiumofficinaleflowers AT liulin combinedanalysisofvolatileterpenoidmetabolismandtranscriptomerevealstranscriptionfactorsrelatedtoterpenesynthaseintwocultivarsofdendrobiumofficinaleflowers AT caiyongping combinedanalysisofvolatileterpenoidmetabolismandtranscriptomerevealstranscriptionfactorsrelatedtoterpenesynthaseintwocultivarsofdendrobiumofficinaleflowers AT fanhonghong combinedanalysisofvolatileterpenoidmetabolismandtranscriptomerevealstranscriptionfactorsrelatedtoterpenesynthaseintwocultivarsofdendrobiumofficinaleflowers |