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RGL2 as an age-dependent factor regulates colon cancer progression
Colon cancer is the fourth leading cause of cancer-related death, and exhibited clinical differences among patients of different ages, including malignancy, metastasis, and mortality rate. Few studies, however, focus on the communications between aging and colon cancer. Here we identified age-depend...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Research Network of Computational and Structural Biotechnology
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8102141/ https://www.ncbi.nlm.nih.gov/pubmed/33995912 http://dx.doi.org/10.1016/j.csbj.2021.04.006 |
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author | Cheng, Qingyu Wu, Yupeng Xia, Honghai Song, Xiaoyuan |
author_facet | Cheng, Qingyu Wu, Yupeng Xia, Honghai Song, Xiaoyuan |
author_sort | Cheng, Qingyu |
collection | PubMed |
description | Colon cancer is the fourth leading cause of cancer-related death, and exhibited clinical differences among patients of different ages, including malignancy, metastasis, and mortality rate. Few studies, however, focus on the communications between aging and colon cancer. Here we identified age-dependent differentially expressed genes (DEGs) in colon cancer using TCGA transcriptome data. Through analyzing multi-omics high throughput data, including ATAC-Seq, DNaseI-Seq and ChIP-Seq, we obtained six age-dependent transcription factors in colon cancer, and their age-dependent targets, significantly affecting patients’ overall survivals. Transcription factor ETS1 potentially functioned in both aging process and colon cancer progression through regulating its targets, RGL2 and SLC2A3. In addition, comparing with its relative lower expression levels in elderly patients, higher levels of RGL2 were detected in young patients, and significantly associated with larger tumor size, higher metastasis, and invasions of colon cancer, consistent with the clinical traits that young patients’ colon cancer exhibited late stages with more aggressiveness. Thus, these elements may serve as keys linking aging and colon cancer, and providing new insights and basis for mechanism researches, as well as diagnosis and therapies of colon cancer, especially in young patients. |
format | Online Article Text |
id | pubmed-8102141 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Research Network of Computational and Structural Biotechnology |
record_format | MEDLINE/PubMed |
spelling | pubmed-81021412021-05-14 RGL2 as an age-dependent factor regulates colon cancer progression Cheng, Qingyu Wu, Yupeng Xia, Honghai Song, Xiaoyuan Comput Struct Biotechnol J Research Article Colon cancer is the fourth leading cause of cancer-related death, and exhibited clinical differences among patients of different ages, including malignancy, metastasis, and mortality rate. Few studies, however, focus on the communications between aging and colon cancer. Here we identified age-dependent differentially expressed genes (DEGs) in colon cancer using TCGA transcriptome data. Through analyzing multi-omics high throughput data, including ATAC-Seq, DNaseI-Seq and ChIP-Seq, we obtained six age-dependent transcription factors in colon cancer, and their age-dependent targets, significantly affecting patients’ overall survivals. Transcription factor ETS1 potentially functioned in both aging process and colon cancer progression through regulating its targets, RGL2 and SLC2A3. In addition, comparing with its relative lower expression levels in elderly patients, higher levels of RGL2 were detected in young patients, and significantly associated with larger tumor size, higher metastasis, and invasions of colon cancer, consistent with the clinical traits that young patients’ colon cancer exhibited late stages with more aggressiveness. Thus, these elements may serve as keys linking aging and colon cancer, and providing new insights and basis for mechanism researches, as well as diagnosis and therapies of colon cancer, especially in young patients. Research Network of Computational and Structural Biotechnology 2021-04-08 /pmc/articles/PMC8102141/ /pubmed/33995912 http://dx.doi.org/10.1016/j.csbj.2021.04.006 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Cheng, Qingyu Wu, Yupeng Xia, Honghai Song, Xiaoyuan RGL2 as an age-dependent factor regulates colon cancer progression |
title | RGL2 as an age-dependent factor regulates colon cancer progression |
title_full | RGL2 as an age-dependent factor regulates colon cancer progression |
title_fullStr | RGL2 as an age-dependent factor regulates colon cancer progression |
title_full_unstemmed | RGL2 as an age-dependent factor regulates colon cancer progression |
title_short | RGL2 as an age-dependent factor regulates colon cancer progression |
title_sort | rgl2 as an age-dependent factor regulates colon cancer progression |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8102141/ https://www.ncbi.nlm.nih.gov/pubmed/33995912 http://dx.doi.org/10.1016/j.csbj.2021.04.006 |
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