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A biomimetic peptide has no effect on the isotopic fractionation during in vitro silica precipitation
The stable isotopic composition of diatom silica is used as a proxy for nutrient utilisation in natural waters. This approach provides essential insight into the current and historic links between biological production, carbon cycling and climate. However, estimates of isotopic fractionation during...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8102562/ https://www.ncbi.nlm.nih.gov/pubmed/33958622 http://dx.doi.org/10.1038/s41598-021-88881-6 |
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author | Cassarino, Lucie Curnow, Paul Hendry, Katharine R. |
author_facet | Cassarino, Lucie Curnow, Paul Hendry, Katharine R. |
author_sort | Cassarino, Lucie |
collection | PubMed |
description | The stable isotopic composition of diatom silica is used as a proxy for nutrient utilisation in natural waters. This approach provides essential insight into the current and historic links between biological production, carbon cycling and climate. However, estimates of isotopic fractionation during diatom silica production from both laboratory and field studies are variable, and the biochemical pathways responsible remain unknown. Here, we investigate silicon isotopic fractionation through a series of chemical precipitation experiments that are analogous to the first stages of intracellular silica formation within the diatom silicon deposition vesicle. The novelty of our experiment is the inclusion of the R5 peptide, which is closely related to a natural biomolecule known to play a role in diatom silicification. Our results suggest that the presence of R5 induces a systematic but non-significant difference in fractionation behaviour. It thus appears that silicon isotopic fractionation in vitro is largely driven by an early kinetic fractionation during rapid precipitation that correlates with the initial amount of dissolved silica in the system. Our findings raise the question of how environmental changes might impact silicon isotopic fractionation in diatoms, and whether frustule archives record information in addition to silica consumption in surface water. |
format | Online Article Text |
id | pubmed-8102562 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-81025622021-05-10 A biomimetic peptide has no effect on the isotopic fractionation during in vitro silica precipitation Cassarino, Lucie Curnow, Paul Hendry, Katharine R. Sci Rep Article The stable isotopic composition of diatom silica is used as a proxy for nutrient utilisation in natural waters. This approach provides essential insight into the current and historic links between biological production, carbon cycling and climate. However, estimates of isotopic fractionation during diatom silica production from both laboratory and field studies are variable, and the biochemical pathways responsible remain unknown. Here, we investigate silicon isotopic fractionation through a series of chemical precipitation experiments that are analogous to the first stages of intracellular silica formation within the diatom silicon deposition vesicle. The novelty of our experiment is the inclusion of the R5 peptide, which is closely related to a natural biomolecule known to play a role in diatom silicification. Our results suggest that the presence of R5 induces a systematic but non-significant difference in fractionation behaviour. It thus appears that silicon isotopic fractionation in vitro is largely driven by an early kinetic fractionation during rapid precipitation that correlates with the initial amount of dissolved silica in the system. Our findings raise the question of how environmental changes might impact silicon isotopic fractionation in diatoms, and whether frustule archives record information in addition to silica consumption in surface water. Nature Publishing Group UK 2021-05-06 /pmc/articles/PMC8102562/ /pubmed/33958622 http://dx.doi.org/10.1038/s41598-021-88881-6 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Cassarino, Lucie Curnow, Paul Hendry, Katharine R. A biomimetic peptide has no effect on the isotopic fractionation during in vitro silica precipitation |
title | A biomimetic peptide has no effect on the isotopic fractionation during in vitro silica precipitation |
title_full | A biomimetic peptide has no effect on the isotopic fractionation during in vitro silica precipitation |
title_fullStr | A biomimetic peptide has no effect on the isotopic fractionation during in vitro silica precipitation |
title_full_unstemmed | A biomimetic peptide has no effect on the isotopic fractionation during in vitro silica precipitation |
title_short | A biomimetic peptide has no effect on the isotopic fractionation during in vitro silica precipitation |
title_sort | biomimetic peptide has no effect on the isotopic fractionation during in vitro silica precipitation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8102562/ https://www.ncbi.nlm.nih.gov/pubmed/33958622 http://dx.doi.org/10.1038/s41598-021-88881-6 |
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