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Highlighting membrane protein structure and function: A celebration of the Protein Data Bank

Biological membranes define the boundaries of cells and compartmentalize the chemical and physical processes required for life. Many biological processes are carried out by proteins embedded in or associated with such membranes. Determination of membrane protein (MP) structures at atomic or near-ato...

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Autores principales: Li, Fei, Egea, Pascal F., Vecchio, Alex J., Asial, Ignacio, Gupta, Meghna, Paulino, Joana, Bajaj, Ruchika, Dickinson, Miles Sasha, Ferguson-Miller, Shelagh, Monk, Brian C., Stroud, Robert M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Biochemistry and Molecular Biology 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8102919/
https://www.ncbi.nlm.nih.gov/pubmed/33744283
http://dx.doi.org/10.1016/j.jbc.2021.100557
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author Li, Fei
Egea, Pascal F.
Vecchio, Alex J.
Asial, Ignacio
Gupta, Meghna
Paulino, Joana
Bajaj, Ruchika
Dickinson, Miles Sasha
Ferguson-Miller, Shelagh
Monk, Brian C.
Stroud, Robert M.
author_facet Li, Fei
Egea, Pascal F.
Vecchio, Alex J.
Asial, Ignacio
Gupta, Meghna
Paulino, Joana
Bajaj, Ruchika
Dickinson, Miles Sasha
Ferguson-Miller, Shelagh
Monk, Brian C.
Stroud, Robert M.
author_sort Li, Fei
collection PubMed
description Biological membranes define the boundaries of cells and compartmentalize the chemical and physical processes required for life. Many biological processes are carried out by proteins embedded in or associated with such membranes. Determination of membrane protein (MP) structures at atomic or near-atomic resolution plays a vital role in elucidating their structural and functional impact in biology. This endeavor has determined 1198 unique MP structures as of early 2021. The value of these structures is expanded greatly by deposition of their three-dimensional (3D) coordinates into the Protein Data Bank (PDB) after the first atomic MP structure was elucidated in 1985. Since then, free access to MP structures facilitates broader and deeper understanding of MPs, which provides crucial new insights into their biological functions. Here we highlight the structural and functional biology of representative MPs and landmarks in the evolution of new technologies, with insights into key developments influenced by the PDB in magnifying their impact.
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spelling pubmed-81029192021-05-14 Highlighting membrane protein structure and function: A celebration of the Protein Data Bank Li, Fei Egea, Pascal F. Vecchio, Alex J. Asial, Ignacio Gupta, Meghna Paulino, Joana Bajaj, Ruchika Dickinson, Miles Sasha Ferguson-Miller, Shelagh Monk, Brian C. Stroud, Robert M. J Biol Chem JBC Reviews Biological membranes define the boundaries of cells and compartmentalize the chemical and physical processes required for life. Many biological processes are carried out by proteins embedded in or associated with such membranes. Determination of membrane protein (MP) structures at atomic or near-atomic resolution plays a vital role in elucidating their structural and functional impact in biology. This endeavor has determined 1198 unique MP structures as of early 2021. The value of these structures is expanded greatly by deposition of their three-dimensional (3D) coordinates into the Protein Data Bank (PDB) after the first atomic MP structure was elucidated in 1985. Since then, free access to MP structures facilitates broader and deeper understanding of MPs, which provides crucial new insights into their biological functions. Here we highlight the structural and functional biology of representative MPs and landmarks in the evolution of new technologies, with insights into key developments influenced by the PDB in magnifying their impact. American Society for Biochemistry and Molecular Biology 2021-03-18 /pmc/articles/PMC8102919/ /pubmed/33744283 http://dx.doi.org/10.1016/j.jbc.2021.100557 Text en © 2021 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle JBC Reviews
Li, Fei
Egea, Pascal F.
Vecchio, Alex J.
Asial, Ignacio
Gupta, Meghna
Paulino, Joana
Bajaj, Ruchika
Dickinson, Miles Sasha
Ferguson-Miller, Shelagh
Monk, Brian C.
Stroud, Robert M.
Highlighting membrane protein structure and function: A celebration of the Protein Data Bank
title Highlighting membrane protein structure and function: A celebration of the Protein Data Bank
title_full Highlighting membrane protein structure and function: A celebration of the Protein Data Bank
title_fullStr Highlighting membrane protein structure and function: A celebration of the Protein Data Bank
title_full_unstemmed Highlighting membrane protein structure and function: A celebration of the Protein Data Bank
title_short Highlighting membrane protein structure and function: A celebration of the Protein Data Bank
title_sort highlighting membrane protein structure and function: a celebration of the protein data bank
topic JBC Reviews
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8102919/
https://www.ncbi.nlm.nih.gov/pubmed/33744283
http://dx.doi.org/10.1016/j.jbc.2021.100557
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