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The Sugar Transporter family in wheat (Triticum aestivum. L): genome-wide identification, classification, and expression profiling during stress in seedlings
The sugar transporter protein (STP) plays a crucial role in regulating plant growth and stress tolerance. We performed genome-wide identification and expression analysis of the STP gene family to investigate the STPSs’ potential roles in the growth of wheat seedlings under stress. Here, a total of 8...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8103919/ https://www.ncbi.nlm.nih.gov/pubmed/33987032 http://dx.doi.org/10.7717/peerj.11371 |
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author | Liu, Hongzhan Li, Chaoqiong Qiao, Lin Hu, Lizong Wang, Xueqin Wang, Junsheng Ruan, Xianle Yang, Guangyu Yin, Guihong Wang, Chunping Sun, Zhongke Ma, Keshi Li, Lili |
author_facet | Liu, Hongzhan Li, Chaoqiong Qiao, Lin Hu, Lizong Wang, Xueqin Wang, Junsheng Ruan, Xianle Yang, Guangyu Yin, Guihong Wang, Chunping Sun, Zhongke Ma, Keshi Li, Lili |
author_sort | Liu, Hongzhan |
collection | PubMed |
description | The sugar transporter protein (STP) plays a crucial role in regulating plant growth and stress tolerance. We performed genome-wide identification and expression analysis of the STP gene family to investigate the STPSs’ potential roles in the growth of wheat seedlings under stress. Here, a total of 81 TaSTP genes containing the Sugar_tr conserved motif were identified within the wheat genome. Bioinformatic studies including phylogenetic tree, chromosome position, and tandem repeat were performed to analyze the identified genes. The 81 TaSTP genes can be classified into five main groups according to their structural and phylogenetic features, with several subgroups, which were located separately on chromosomes A, B, and D. Moreover, six gene clusters were formed with more than three genes each. The results of three comparative syntenic maps of wheat associated with three representative species suggested that STP genes have strong relationships in monocots. qRT-PCR analysis confirmed that most TaSTP genes displayed different expression profiles after seedlings were subjected to six days of different stress (10% PEG6000, 150 mM NaCl, and their combination, respectively), suggesting that these genes may be involved in regulating plant growth and stress tolerance. In conclusion, 81 TaSTP genes were identified and their expressions changed under stress, indicating TaSTP’s potential roles in wheat growth monosaccharide distribution is regulated. |
format | Online Article Text |
id | pubmed-8103919 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-81039192021-05-12 The Sugar Transporter family in wheat (Triticum aestivum. L): genome-wide identification, classification, and expression profiling during stress in seedlings Liu, Hongzhan Li, Chaoqiong Qiao, Lin Hu, Lizong Wang, Xueqin Wang, Junsheng Ruan, Xianle Yang, Guangyu Yin, Guihong Wang, Chunping Sun, Zhongke Ma, Keshi Li, Lili PeerJ Agricultural Science The sugar transporter protein (STP) plays a crucial role in regulating plant growth and stress tolerance. We performed genome-wide identification and expression analysis of the STP gene family to investigate the STPSs’ potential roles in the growth of wheat seedlings under stress. Here, a total of 81 TaSTP genes containing the Sugar_tr conserved motif were identified within the wheat genome. Bioinformatic studies including phylogenetic tree, chromosome position, and tandem repeat were performed to analyze the identified genes. The 81 TaSTP genes can be classified into five main groups according to their structural and phylogenetic features, with several subgroups, which were located separately on chromosomes A, B, and D. Moreover, six gene clusters were formed with more than three genes each. The results of three comparative syntenic maps of wheat associated with three representative species suggested that STP genes have strong relationships in monocots. qRT-PCR analysis confirmed that most TaSTP genes displayed different expression profiles after seedlings were subjected to six days of different stress (10% PEG6000, 150 mM NaCl, and their combination, respectively), suggesting that these genes may be involved in regulating plant growth and stress tolerance. In conclusion, 81 TaSTP genes were identified and their expressions changed under stress, indicating TaSTP’s potential roles in wheat growth monosaccharide distribution is regulated. PeerJ Inc. 2021-05-04 /pmc/articles/PMC8103919/ /pubmed/33987032 http://dx.doi.org/10.7717/peerj.11371 Text en ©2021 Liu et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Agricultural Science Liu, Hongzhan Li, Chaoqiong Qiao, Lin Hu, Lizong Wang, Xueqin Wang, Junsheng Ruan, Xianle Yang, Guangyu Yin, Guihong Wang, Chunping Sun, Zhongke Ma, Keshi Li, Lili The Sugar Transporter family in wheat (Triticum aestivum. L): genome-wide identification, classification, and expression profiling during stress in seedlings |
title | The Sugar Transporter family in wheat (Triticum aestivum. L): genome-wide identification, classification, and expression profiling during stress in seedlings |
title_full | The Sugar Transporter family in wheat (Triticum aestivum. L): genome-wide identification, classification, and expression profiling during stress in seedlings |
title_fullStr | The Sugar Transporter family in wheat (Triticum aestivum. L): genome-wide identification, classification, and expression profiling during stress in seedlings |
title_full_unstemmed | The Sugar Transporter family in wheat (Triticum aestivum. L): genome-wide identification, classification, and expression profiling during stress in seedlings |
title_short | The Sugar Transporter family in wheat (Triticum aestivum. L): genome-wide identification, classification, and expression profiling during stress in seedlings |
title_sort | sugar transporter family in wheat (triticum aestivum. l): genome-wide identification, classification, and expression profiling during stress in seedlings |
topic | Agricultural Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8103919/ https://www.ncbi.nlm.nih.gov/pubmed/33987032 http://dx.doi.org/10.7717/peerj.11371 |
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