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Why We Are Losing the War Against COVID-19 on the Data Front and How to Reverse the Situation

With over 117 million COVID-19–positive cases declared and the death count approaching 3 million, we would expect that the highly digitalized health systems of high-income countries would have collected, processed, and analyzed large quantities of clinical data from patients with COVID-19. Those dat...

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Autores principales: Prieto-Merino, David, Bebiano Da Providencia E Costa, Rui, Bacallao Gallestey, Jorge, Sofat, Reecha, Chung, Sheng-Chia, Potts, Henry
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8104306/
https://www.ncbi.nlm.nih.gov/pubmed/34042100
http://dx.doi.org/10.2196/20617
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author Prieto-Merino, David
Bebiano Da Providencia E Costa, Rui
Bacallao Gallestey, Jorge
Sofat, Reecha
Chung, Sheng-Chia
Potts, Henry
author_facet Prieto-Merino, David
Bebiano Da Providencia E Costa, Rui
Bacallao Gallestey, Jorge
Sofat, Reecha
Chung, Sheng-Chia
Potts, Henry
author_sort Prieto-Merino, David
collection PubMed
description With over 117 million COVID-19–positive cases declared and the death count approaching 3 million, we would expect that the highly digitalized health systems of high-income countries would have collected, processed, and analyzed large quantities of clinical data from patients with COVID-19. Those data should have served to answer important clinical questions such as: what are the risk factors for becoming infected? What are good clinical variables to predict prognosis? What kinds of patients are more likely to survive mechanical ventilation? Are there clinical subphenotypes of the disease? All these, and many more, are crucial questions to improve our clinical strategies against the epidemic and save as many lives as possible. One might assume that in the era of big data and machine learning, there would be an army of scientists crunching petabytes of clinical data to answer these questions. However, nothing could be further from the truth. Our health systems have proven to be completely unprepared to generate, in a timely manner, a flow of clinical data that could feed these analyses. Despite gigabytes of data being generated every day, the vast quantity is locked in secure hospital data servers and is not being made available for analysis. Routinely collected clinical data are, by and large, regarded as a tool to inform decisions about individual patients, and not as a key resource to answer clinical questions through statistical analysis. The initiatives to extract COVID-19 clinical data are often promoted by private groups of individuals and not by health systems, and are uncoordinated and inefficient. The consequence is that we have more clinical data on COVID-19 than on any other epidemic in history, but we have failed to analyze this information quickly enough to make a difference. In this viewpoint, we expose this situation and suggest concrete ideas that health systems could implement to dynamically analyze their routine clinical data, becoming learning health systems and reversing the current situation.
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spelling pubmed-81043062021-05-12 Why We Are Losing the War Against COVID-19 on the Data Front and How to Reverse the Situation Prieto-Merino, David Bebiano Da Providencia E Costa, Rui Bacallao Gallestey, Jorge Sofat, Reecha Chung, Sheng-Chia Potts, Henry JMIRx Med Viewpoint With over 117 million COVID-19–positive cases declared and the death count approaching 3 million, we would expect that the highly digitalized health systems of high-income countries would have collected, processed, and analyzed large quantities of clinical data from patients with COVID-19. Those data should have served to answer important clinical questions such as: what are the risk factors for becoming infected? What are good clinical variables to predict prognosis? What kinds of patients are more likely to survive mechanical ventilation? Are there clinical subphenotypes of the disease? All these, and many more, are crucial questions to improve our clinical strategies against the epidemic and save as many lives as possible. One might assume that in the era of big data and machine learning, there would be an army of scientists crunching petabytes of clinical data to answer these questions. However, nothing could be further from the truth. Our health systems have proven to be completely unprepared to generate, in a timely manner, a flow of clinical data that could feed these analyses. Despite gigabytes of data being generated every day, the vast quantity is locked in secure hospital data servers and is not being made available for analysis. Routinely collected clinical data are, by and large, regarded as a tool to inform decisions about individual patients, and not as a key resource to answer clinical questions through statistical analysis. The initiatives to extract COVID-19 clinical data are often promoted by private groups of individuals and not by health systems, and are uncoordinated and inefficient. The consequence is that we have more clinical data on COVID-19 than on any other epidemic in history, but we have failed to analyze this information quickly enough to make a difference. In this viewpoint, we expose this situation and suggest concrete ideas that health systems could implement to dynamically analyze their routine clinical data, becoming learning health systems and reversing the current situation. JMIR Publications 2021-05-05 /pmc/articles/PMC8104306/ /pubmed/34042100 http://dx.doi.org/10.2196/20617 Text en ©David Prieto-Merino, Rui Bebiano Da Providencia E Costa, Jorge Bacallao Gallestey, Reecha Sofat, Sheng-Chia Chung, Henry Potts. Originally published in JMIRx Med (https://med.jmirx.org), 05.05.2021. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIRx Med, is properly cited. The complete bibliographic information, a link to the original publication on http://med.jmirx.org/, as well as this copyright and license information must be included.
spellingShingle Viewpoint
Prieto-Merino, David
Bebiano Da Providencia E Costa, Rui
Bacallao Gallestey, Jorge
Sofat, Reecha
Chung, Sheng-Chia
Potts, Henry
Why We Are Losing the War Against COVID-19 on the Data Front and How to Reverse the Situation
title Why We Are Losing the War Against COVID-19 on the Data Front and How to Reverse the Situation
title_full Why We Are Losing the War Against COVID-19 on the Data Front and How to Reverse the Situation
title_fullStr Why We Are Losing the War Against COVID-19 on the Data Front and How to Reverse the Situation
title_full_unstemmed Why We Are Losing the War Against COVID-19 on the Data Front and How to Reverse the Situation
title_short Why We Are Losing the War Against COVID-19 on the Data Front and How to Reverse the Situation
title_sort why we are losing the war against covid-19 on the data front and how to reverse the situation
topic Viewpoint
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8104306/
https://www.ncbi.nlm.nih.gov/pubmed/34042100
http://dx.doi.org/10.2196/20617
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