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A method for utilizing automated machine learning for histopathological classification of testis based on Johnsen scores
We examined whether a tool for determining Johnsen scores automatically using artificial intelligence (AI) could be used in place of traditional Johnsen scoring to support pathologists’ evaluations. Average precision, precision, and recall were assessed by the Google Cloud AutoML Vision platform. We...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8107178/ https://www.ncbi.nlm.nih.gov/pubmed/33967273 http://dx.doi.org/10.1038/s41598-021-89369-z |
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author | Ito, Yurika Unagami, Mami Yamabe, Fumito Mitsui, Yozo Nakajima, Koichi Nagao, Koichi Kobayashi, Hideyuki |
author_facet | Ito, Yurika Unagami, Mami Yamabe, Fumito Mitsui, Yozo Nakajima, Koichi Nagao, Koichi Kobayashi, Hideyuki |
author_sort | Ito, Yurika |
collection | PubMed |
description | We examined whether a tool for determining Johnsen scores automatically using artificial intelligence (AI) could be used in place of traditional Johnsen scoring to support pathologists’ evaluations. Average precision, precision, and recall were assessed by the Google Cloud AutoML Vision platform. We obtained testicular tissues for 275 patients and were able to use haematoxylin and eosin (H&E)-stained glass microscope slides from 264 patients. In addition, we cut out of parts of the histopathology images (5.0 × 5.0 cm) for expansion of Johnsen’s characteristic areas with seminiferous tubules. We defined four labels: Johnsen score 1–3, 4–5, 6–7, and 8–10 to distinguish Johnsen scores in clinical practice. All images were uploaded to the Google Cloud AutoML Vision platform. We obtained a dataset of 7155 images at magnification 400× and a dataset of 9822 expansion images for the 5.0 × 5.0 cm cutouts. For the 400× magnification image dataset, the average precision (positive predictive value) of the algorithm was 82.6%, precision was 80.31%, and recall was 60.96%. For the expansion image dataset (5.0 × 5.0 cm), the average precision was 99.5%, precision was 96.29%, and recall was 96.23%. This is the first report of an AI-based algorithm for predicting Johnsen scores. |
format | Online Article Text |
id | pubmed-8107178 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-81071782021-05-12 A method for utilizing automated machine learning for histopathological classification of testis based on Johnsen scores Ito, Yurika Unagami, Mami Yamabe, Fumito Mitsui, Yozo Nakajima, Koichi Nagao, Koichi Kobayashi, Hideyuki Sci Rep Article We examined whether a tool for determining Johnsen scores automatically using artificial intelligence (AI) could be used in place of traditional Johnsen scoring to support pathologists’ evaluations. Average precision, precision, and recall were assessed by the Google Cloud AutoML Vision platform. We obtained testicular tissues for 275 patients and were able to use haematoxylin and eosin (H&E)-stained glass microscope slides from 264 patients. In addition, we cut out of parts of the histopathology images (5.0 × 5.0 cm) for expansion of Johnsen’s characteristic areas with seminiferous tubules. We defined four labels: Johnsen score 1–3, 4–5, 6–7, and 8–10 to distinguish Johnsen scores in clinical practice. All images were uploaded to the Google Cloud AutoML Vision platform. We obtained a dataset of 7155 images at magnification 400× and a dataset of 9822 expansion images for the 5.0 × 5.0 cm cutouts. For the 400× magnification image dataset, the average precision (positive predictive value) of the algorithm was 82.6%, precision was 80.31%, and recall was 60.96%. For the expansion image dataset (5.0 × 5.0 cm), the average precision was 99.5%, precision was 96.29%, and recall was 96.23%. This is the first report of an AI-based algorithm for predicting Johnsen scores. Nature Publishing Group UK 2021-05-10 /pmc/articles/PMC8107178/ /pubmed/33967273 http://dx.doi.org/10.1038/s41598-021-89369-z Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Ito, Yurika Unagami, Mami Yamabe, Fumito Mitsui, Yozo Nakajima, Koichi Nagao, Koichi Kobayashi, Hideyuki A method for utilizing automated machine learning for histopathological classification of testis based on Johnsen scores |
title | A method for utilizing automated machine learning for histopathological classification of testis based on Johnsen scores |
title_full | A method for utilizing automated machine learning for histopathological classification of testis based on Johnsen scores |
title_fullStr | A method for utilizing automated machine learning for histopathological classification of testis based on Johnsen scores |
title_full_unstemmed | A method for utilizing automated machine learning for histopathological classification of testis based on Johnsen scores |
title_short | A method for utilizing automated machine learning for histopathological classification of testis based on Johnsen scores |
title_sort | method for utilizing automated machine learning for histopathological classification of testis based on johnsen scores |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8107178/ https://www.ncbi.nlm.nih.gov/pubmed/33967273 http://dx.doi.org/10.1038/s41598-021-89369-z |
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