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A novel comprehensive immune-related gene signature as a promising survival predictor for the patients with head and neck squamous cell carcinoma

Head and neck squamous cell carcinoma (HNSCC), the most frequent subtype of head and neck cancer, continues to have a poor prognosis with no improvement. The TNM stage is not satisfactory for individualized prognostic assessment and it does not predict response to therapy. In the present study, we d...

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Autores principales: Fang, Ruihua, Iqbal, Muhammad, Chen, Lin, Liao, Jing, Luo, Jierong, Wei, Fanqin, Wen, Weiping, Sun, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8109104/
https://www.ncbi.nlm.nih.gov/pubmed/33867351
http://dx.doi.org/10.18632/aging.202842
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author Fang, Ruihua
Iqbal, Muhammad
Chen, Lin
Liao, Jing
Luo, Jierong
Wei, Fanqin
Wen, Weiping
Sun, Wei
author_facet Fang, Ruihua
Iqbal, Muhammad
Chen, Lin
Liao, Jing
Luo, Jierong
Wei, Fanqin
Wen, Weiping
Sun, Wei
author_sort Fang, Ruihua
collection PubMed
description Head and neck squamous cell carcinoma (HNSCC), the most frequent subtype of head and neck cancer, continues to have a poor prognosis with no improvement. The TNM stage is not satisfactory for individualized prognostic assessment and it does not predict response to therapy. In the present study, we downloaded the gene expression profiles from TCGA database to establish a training set and GEO database for a validation set. In the training set, we developed an 10 immune-related genes signature which had superior predictive value compared with TNM stage. A nomogram including clinical characteristics was also constructed for accurate prediction. Furthermore, it was determined that our prognostic signature might act as an independent factor for predicting the survival of HNSCC patients. As for the immune microenvironment, our results showed higher immune checkpoint expression (CLTA-4 and PD-1) in low-risk group which might reflect a positive immunotherapy response. Thus, our signature not only provided a promising biomarker for survival prediction, but might be evaluated as an indicator for personalized immunotherapy in patients with HNSCC.
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spelling pubmed-81091042021-05-12 A novel comprehensive immune-related gene signature as a promising survival predictor for the patients with head and neck squamous cell carcinoma Fang, Ruihua Iqbal, Muhammad Chen, Lin Liao, Jing Luo, Jierong Wei, Fanqin Wen, Weiping Sun, Wei Aging (Albany NY) Research Paper Head and neck squamous cell carcinoma (HNSCC), the most frequent subtype of head and neck cancer, continues to have a poor prognosis with no improvement. The TNM stage is not satisfactory for individualized prognostic assessment and it does not predict response to therapy. In the present study, we downloaded the gene expression profiles from TCGA database to establish a training set and GEO database for a validation set. In the training set, we developed an 10 immune-related genes signature which had superior predictive value compared with TNM stage. A nomogram including clinical characteristics was also constructed for accurate prediction. Furthermore, it was determined that our prognostic signature might act as an independent factor for predicting the survival of HNSCC patients. As for the immune microenvironment, our results showed higher immune checkpoint expression (CLTA-4 and PD-1) in low-risk group which might reflect a positive immunotherapy response. Thus, our signature not only provided a promising biomarker for survival prediction, but might be evaluated as an indicator for personalized immunotherapy in patients with HNSCC. Impact Journals 2021-04-17 /pmc/articles/PMC8109104/ /pubmed/33867351 http://dx.doi.org/10.18632/aging.202842 Text en Copyright: © 2021 Fang et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Fang, Ruihua
Iqbal, Muhammad
Chen, Lin
Liao, Jing
Luo, Jierong
Wei, Fanqin
Wen, Weiping
Sun, Wei
A novel comprehensive immune-related gene signature as a promising survival predictor for the patients with head and neck squamous cell carcinoma
title A novel comprehensive immune-related gene signature as a promising survival predictor for the patients with head and neck squamous cell carcinoma
title_full A novel comprehensive immune-related gene signature as a promising survival predictor for the patients with head and neck squamous cell carcinoma
title_fullStr A novel comprehensive immune-related gene signature as a promising survival predictor for the patients with head and neck squamous cell carcinoma
title_full_unstemmed A novel comprehensive immune-related gene signature as a promising survival predictor for the patients with head and neck squamous cell carcinoma
title_short A novel comprehensive immune-related gene signature as a promising survival predictor for the patients with head and neck squamous cell carcinoma
title_sort novel comprehensive immune-related gene signature as a promising survival predictor for the patients with head and neck squamous cell carcinoma
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8109104/
https://www.ncbi.nlm.nih.gov/pubmed/33867351
http://dx.doi.org/10.18632/aging.202842
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